eF-site ID 4esv-E PDB Code 4esv Chain E click to enlarge Title A New Twist on the Translocation Mechanism of Helicases from the Structure of DnaB with its Substrates Classification HYDROLASE/DNA Compound 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3' Source (4ESV) Sequence E:  SIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIF HAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSEL ADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTR EDEIDVLLDEADRKIMEGAFKNIKDILVQTYDNIEMLHNI TGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNI AQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNL RTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRA KCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEIS RSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRES GSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGP VGTVQLAFIKEYNKFVNL Description Functional site 1) chain E residue 212 type sequence P description BINDING SITE FOR RESIDUE ALF D 503 source : BC6 2) chain E residue 216 type sequence K description BINDING SITE FOR RESIDUE ALF D 503 source : BC6 3) chain E residue 241 type sequence E description BINDING SITE FOR RESIDUE ALF D 503 source : BC6 4) chain E residue 362 type sequence Q description BINDING SITE FOR RESIDUE ALF D 503 source : BC6 5) chain E residue 213 type sequence S description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 6) chain E residue 214 type sequence V description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 7) chain E residue 215 type sequence G description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 8) chain E residue 216 type sequence K description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 9) chain E residue 217 type sequence T description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 10) chain E residue 218 type sequence A description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 11) chain E residue 242 type sequence M description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 12) chain E residue 250 type sequence R description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 13) chain E residue 260 type sequence A description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 14) chain E residue 261 type sequence Q description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 15) chain E residue 264 type sequence R description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 16) chain E residue 431 type sequence F description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 17) chain E residue 433 type sequence K description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 18) chain E residue 436 type sequence N description BINDING SITE FOR RESIDUE GDP E 501 source : BC8 19) chain E residue 217 type sequence T description BINDING SITE FOR RESIDUE CA E 502 source : BC9 20) chain E residue 241 type sequence E description BINDING SITE FOR RESIDUE CA E 502 source : BC9 21) chain E residue 242 type sequence M description BINDING SITE FOR RESIDUE CA E 502 source : BC9 22) chain E residue 320 type sequence D description BINDING SITE FOR RESIDUE CA E 502 source : BC9 23) chain E residue 418 type sequence K description BINDING SITE FOR RESIDUE ALF E 503 source : CC1 24) chain E residue 420 type sequence R description BINDING SITE FOR RESIDUE ALF E 503 source : CC1 25) chain E residue 13 type sequence S description BINDING SITE FOR RESIDUE MES E 504 source : CC2 26) chain E residue 112 type sequence K description BINDING SITE FOR RESIDUE MES E 504 source : CC2 27) chain E residue 116 type sequence R description BINDING SITE FOR RESIDUE MES E 504 source : CC2 28) chain E residue 419 type sequence Q description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 29) chain E residue 421 type sequence N description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 30) chain E residue 422 type sequence G description BINDING SITE FOR RESIDUE GDP F 501 source : CC3 31) chain E residue 241 type ACT_SITE sequence E description Nucleophile => ECO:0000305|PubMed:12235389, ECO:0000305|PubMed:23022319 source Swiss-Prot : SWS_FT_FI1 32) chain E residue 213 type BINDING sequence S description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 33) chain E residue 215 type BINDING sequence G description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 34) chain E residue 216 type BINDING sequence K description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 35) chain E residue 217 type BINDING sequence T description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 36) chain E residue 218 type BINDING sequence A description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 37) chain E residue 250 type BINDING sequence R description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 38) chain E residue 418 type BINDING sequence K description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 39) chain E residue 419 type BINDING sequence Q description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 40) chain E residue 420 type BINDING sequence R description BINDING => ECO:0000305|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI2 41) chain E residue 362 type BINDING sequence Q description BINDING => ECO:0000305|PubMed:23022319 source Swiss-Prot : SWS_FT_FI3 42) chain E residue 381 type BINDING sequence R description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI4 43) chain E residue 382 type BINDING sequence E description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI4 44) chain E residue 384 type BINDING sequence G description BINDING => ECO:0000269|PubMed:23022319, ECO:0007744|PDB:4ESV source Swiss-Prot : SWS_FT_FI4 45) chain E residue 362 type SITE sequence Q description Gamma-phosphate sensor => ECO:0000305|PubMed:12235389 source Swiss-Prot : SWS_FT_FI5

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