|
|
eF-site ID
|
4esv-B |
|
PDB Code
|
4esv |
|
Chain
|
B |
|
click to enlarge
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Title
|
A New Twist on the Translocation Mechanism of Helicases from the Structure of DnaB with its Substrates |
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Classification
|
HYDROLASE/DNA |
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Compound
|
5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3' |
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Source
|
(4ESV) |
|
|
Sequence
|
B: |
SERIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYR
AAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGG
VSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSI
AQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDI
LVQTYDNIEMLHNGEITGIPTGFTELDRMTSGFQRSDLII
VAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQL
VMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAG
IYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQG
SGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRRP
MMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEII
IAKQRNGPVGTVQLAFIKEYNKFVNLERRF
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Description
|
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Functional site
|
|
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1)
|
chain |
B |
| residue |
419 |
| type |
|
| sequence |
Q
|
| description |
BINDING SITE FOR RESIDUE GDP C 501
|
| source |
: AC8
|
|
|
2)
|
chain |
B |
| residue |
421 |
| type |
|
| sequence |
N
|
| description |
BINDING SITE FOR RESIDUE GDP C 501
|
| source |
: AC8
|
|
|
3)
|
chain |
B |
| residue |
422 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE GDP C 501
|
| source |
: AC8
|
|
|
4)
|
chain |
B |
| residue |
423 |
| type |
|
| sequence |
P
|
| description |
BINDING SITE FOR RESIDUE GDP C 501
|
| source |
: AC8
|
|
|
5)
|
chain |
B |
| residue |
418 |
| type |
|
| sequence |
K
|
| description |
BINDING SITE FOR RESIDUE ALF C 503
|
| source |
: BC1
|
|
|
6)
|
chain |
B |
| residue |
420 |
| type |
|
| sequence |
R
|
| description |
BINDING SITE FOR RESIDUE ALF C 503
|
| source |
: BC1
|
|
|
|