eF-site ID 4es0-AC
PDB Code 4es0
Chain A, C

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Title X-ray structure of WDR5-SETd1b Win motif peptide binary complex
Classification Transcription/Transferase
Compound WD repeat-containing protein 5
Source Homo sapiens (Human) (SET1B_HUMAN)
Sequence A:  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIK
IWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKT
LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD
ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS
YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL
AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG
GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH
PTENIIASAALENDKTIKLWKSDC
C:  GCARSEG
Description


Functional site

1) chain A
residue 46
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI3

2) chain A
residue 107
type SITE
sequence D
description Important for interaction with histone H3
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 133
type SITE
sequence F
description Important for interaction with histone H3
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 263
type SITE
sequence F
description Important for interaction with histone H3
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 322
type SITE
sequence E
description Important for interaction with histone H3
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 112
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI2

7) chain A
residue 102-116
type prosite
sequence LVSASDDKTLKIWDV
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSAsdDkTLKIWDV
source prosite : PS00678

8) chain A
residue 144-158
type prosite
sequence IVSGSFDESVRIWDV
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSAsdDkTLKIWDV
source prosite : PS00678

9) chain A
residue 186-200
type prosite
sequence IVSSSYDGLCRIWDT
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSAsdDkTLKIWDV
source prosite : PS00678

10) chain A
residue 274-288
type prosite
sequence IVSGSEDNLVYIWNL
description WD_REPEATS_1 Trp-Asp (WD) repeats signature. LVSAsdDkTLKIWDV
source prosite : PS00678


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