eF-site ID 4elv-ABC
PDB Code 4elv
Chain A, B, C

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Title Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing modified pyrimidines
Classification TRANSFERASE/DNA
Compound DNA polymerase I, thermostable
Source Thermus aquaticus (4ELV)
Sequence A:  LEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVH
RAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDP
MLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLF
ANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDV
AYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERV
LFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKIL
QYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGR
LSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYSQ
IELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREA
VDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFI
ERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDL
EARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLE
EMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPL
AVPLEVEVGIGEDWLSAKE
B:  GACCACGGCGCX
C:  GGGCGCCGTGGTC
Description


Functional site

1) chain A
residue 610
type
sequence D
description BINDING SITE FOR RESIDUE MG A 901
source : AC1

2) chain A
residue 786
type
sequence E
description BINDING SITE FOR RESIDUE MG A 901
source : AC1

3) chain A
residue 573
type
sequence R
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

4) chain A
residue 610
type
sequence D
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

5) chain A
residue 611
type
sequence Y
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

6) chain A
residue 612
type
sequence S
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

7) chain A
residue 613
type
sequence Q
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

8) chain A
residue 614
type
sequence I
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

9) chain A
residue 615
type
sequence E
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

10) chain A
residue 639
type
sequence H
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

11) chain A
residue 659
type
sequence R
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

12) chain A
residue 660
type
sequence R
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

13) chain A
residue 663
type
sequence K
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

14) chain A
residue 667
type
sequence F
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

15) chain A
residue 785
type
sequence D
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

16) chain B
residue 112
type
sequence X
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

17) chain C
residue 204
type
sequence G
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

18) chain C
residue 205
type
sequence G
description BINDING SITE FOR RESIDUE 0R7 A 902
source : AC2

19) chain A
residue 544
type
sequence T
description BINDING SITE FOR RESIDUE GOL A 903
source : AC3

20) chain A
residue 545
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 903
source : AC3

21) chain A
residue 579
type
sequence P
description BINDING SITE FOR RESIDUE GOL A 903
source : AC3

22) chain A
residue 580
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 903
source : AC3

23) chain A
residue 583
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 903
source : AC3

24) chain C
residue 209
type
sequence C
description BINDING SITE FOR RESIDUE GOL A 903
source : AC3

25) chain C
residue 210
type
sequence C
description BINDING SITE FOR RESIDUE GOL A 903
source : AC3

26) chain A
residue 371
type
sequence D
description BINDING SITE FOR RESIDUE PGE A 904
source : AC4

27) chain A
residue 417
type
sequence W
description BINDING SITE FOR RESIDUE PGE A 904
source : AC4

28) chain A
residue 431
type
sequence R
description BINDING SITE FOR RESIDUE PGE A 904
source : AC4

29) chain A
residue 435
type
sequence R
description BINDING SITE FOR RESIDUE PGE A 904
source : AC4

30) chain A
residue 425
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 905
source : AC5

31) chain A
residue 723
type
sequence L
description BINDING SITE FOR RESIDUE GOL A 905
source : AC5

32) chain A
residue 724
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 905
source : AC5

33) chain A
residue 774
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 905
source : AC5

34) chain A
residue 811
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 905
source : AC5

35) chain A
residue 452
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 906
source : AC6

36) chain A
residue 455
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 906
source : AC6

37) chain A
residue 593
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 906
source : AC6

38) chain A
residue 596
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 906
source : AC6

39) chain A
residue 599
type
sequence I
description BINDING SITE FOR RESIDUE GOL A 906
source : AC6

40) chain A
residue 311
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 907
source : AC7

41) chain A
residue 400
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 907
source : AC7

42) chain A
residue 405
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 907
source : AC7

43) chain A
residue 610
type
sequence D
description BINDING SITE FOR RESIDUE CA A 908
source : AC8

44) chain A
residue 611
type
sequence Y
description BINDING SITE FOR RESIDUE CA A 908
source : AC8

45) chain A
residue 785
type
sequence D
description BINDING SITE FOR RESIDUE CA A 908
source : AC8

46) chain C
residue 205
type
sequence G
description BINDING SITE FOR RESIDUE GOL C 301
source : BC1

47) chain C
residue 206
type
sequence G
description BINDING SITE FOR RESIDUE GOL C 301
source : BC1

48) chain C
residue 214
type
sequence G
description BINDING SITE FOR RESIDUE MG C 302
source : BC2

49) chain A
residue 570
type
sequence A
description BINDING SITE FOR RESIDUE EDO C 303
source : BC3

50) chain A
residue 728
type
sequence R
description BINDING SITE FOR RESIDUE EDO C 303
source : BC3

51) chain C
residue 206
type
sequence G
description BINDING SITE FOR RESIDUE EDO C 303
source : BC3

52) chain C
residue 207
type
sequence C
description BINDING SITE FOR RESIDUE EDO C 303
source : BC3

53) chain A
residue 659-678
type prosite
sequence RRAAKTINFGVLYGMSAHRL
description DNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL
source prosite : PS00447


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