eF-site ID 4eiz-ABCD
PDB Code 4eiz
Chain A, B, C, D

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Title Structure of Nb113 bound to apoDHFR
Classification OXIDOREDUCTASE/IMMUNE SYSTEM
Compound Dihydrofolate reductase
Source Escherichia coli (strain K12) (4EIZ)
Sequence A:  MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPV
IMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDE
AIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVE
GDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
B:  MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPV
IMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDE
AIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVE
GDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
C:  VQLQESGGGLVQAGGSLRLSCTASGRTFSSYAMGWFRQTP
GKEREFVAAITWGGSTTLYADSVKGRFTMSRDNAKNTVYL
QMNSLKPEDTAVYYCAADGSQYRSTYSFRDKPDYGSWGQG
TQVTVSS
D:  VQLQESGGGLVQAGGSLRLSCTASGRTFSSYAMGWFRQTP
GKEREFVAAITWGGSTTLYADSVKGRFTMSRDNAKNTVYL
QMNSLKPEDTAVYYCAADGSQYRSTYSFRDKPDYGSWGQG
TQVTVSS
Description (1)  Dihydrofolate reductase (E.C.1.5.1.3), Nb113 Camel antibody fragment


Functional site

1) chain A
residue 5
type BINDING
sequence I
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

2) chain B
residue 113
type BINDING
sequence T
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 27
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 52
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 57
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 113
type BINDING
sequence T
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 5
type BINDING
sequence I
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 27
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 52
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 57
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:9012674
source Swiss-Prot : SWS_FT_FI1

11) chain A
residue 7
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

12) chain B
residue 63
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

13) chain B
residue 76
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

14) chain B
residue 95
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

15) chain A
residue 13
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 45
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 63
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

18) chain A
residue 76
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

19) chain A
residue 95
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

20) chain B
residue 7
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

21) chain B
residue 13
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

22) chain B
residue 45
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:19374017
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 13-35
type prosite
sequence VIGMENAMPWNLPADLAWFKRNT
description DHFR_1 Dihydrofolate reductase (DHFR) domain signature. VIGmenaMPWnlpa.DlawFkrnT
source prosite : PS00075


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