eF-site ID 4edz-ABCD PDB Code 4edz Chain A, B, C, D click to enlarge Title Crystal structure of hH-PGDS with water displacing inhibitor Classification Isomerase/Isomerase inhibitor Compound Hematopoietic prostaglandin D synthase Source Homo sapiens (Human) (HPGDS_HUMAN) Sequence A:  PNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPE IKSTLPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGNT EMEQCHVDAIVDTLDDFMSCFPWAEKKQDVKEQMFNELLT YNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLL VFKPDLLDNHPRLVTLRKKVQAIPAVANWIKRRPQTKL B:  APNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWP EIKSTLPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGN TEMEQCHVDAIVDTLDDFMSCFPWAEQDVKEQMFNELLTY NAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLV FKPDLLDNHPRLVTLRKKVQAIPAVANWIKRRPQTKL C:  PNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPE IKSTLPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGNT EMEQCHVDAIVDTLDDFMSCFPWAEKKQDVKEQMFNELLT YNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLL VFKPDLLDNHPRLVTLRKKVQAIPAVANWIKRRPQTKL D:  APNYKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWP EIKSTLPFGKIPILEVDGLTLHQSLAIARYLTKNTDLAGN TEMEQCHVDAIVDTLDDFMSCFPWAEKKQDVKEQMFNELL TYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTL LVFKPDLLDNHPRLVTLRKKVQAIPAVANWIKRRPQTKL Description Functional site 1) chain A residue 8 type sequence Y description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 2) chain A residue 14 type sequence R description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 3) chain A residue 39 type sequence W description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 4) chain A residue 43 type sequence K description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 5) chain A residue 50 type sequence K description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 6) chain A residue 51 type sequence I description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 7) chain A residue 52 type sequence P description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 8) chain A residue 63 type sequence Q description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 9) chain A residue 64 type sequence S description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 10) chain B residue 97 type sequence D description BINDING SITE FOR RESIDUE GSH A 201 source : AC1 11) chain A residue 11 type sequence M description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 12) chain A residue 13 type sequence G description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 13) chain A residue 14 type sequence R description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 14) chain A residue 36 type sequence Q description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 15) chain A residue 96 type sequence D description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 16) chain A residue 99 type sequence M description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 17) chain A residue 104 type sequence W description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 18) chain A residue 152 type sequence Y description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 19) chain A residue 155 type sequence I description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 20) chain A residue 199 type sequence L description BINDING SITE FOR RESIDUE 0O5 A 202 source : AC2 21) chain A residue 97 type sequence D description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 22) chain B residue 8 type sequence Y description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 23) chain B residue 14 type sequence R description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 24) chain B residue 39 type sequence W description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 25) chain B residue 43 type sequence K description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 26) chain B residue 50 type sequence K description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 27) chain B residue 51 type sequence I description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 28) chain B residue 52 type sequence P description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 29) chain B residue 63 type sequence Q description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 30) chain B residue 64 type sequence S description BINDING SITE FOR RESIDUE GSH B 202 source : AC4 31) chain B residue 9 type sequence F description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 32) chain B residue 11 type sequence M description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 33) chain B residue 13 type sequence G description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 34) chain B residue 14 type sequence R description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 35) chain B residue 36 type sequence Q description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 36) chain B residue 96 type sequence D description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 37) chain B residue 99 type sequence M description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 38) chain B residue 100 type sequence S description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 39) chain B residue 104 type sequence W description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 40) chain B residue 152 type sequence Y description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 41) chain B residue 155 type sequence I description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 42) chain B residue 199 type sequence L description BINDING SITE FOR RESIDUE 0O5 B 203 source : AC5 43) chain C residue 8 type sequence Y description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 44) chain C residue 14 type sequence R description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 45) chain C residue 39 type sequence W description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 46) chain C residue 43 type sequence K description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 47) chain C residue 50 type sequence K description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 48) chain C residue 51 type sequence I description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 49) chain C residue 63 type sequence Q description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 50) chain C residue 64 type sequence S description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 51) chain D residue 97 type sequence D description BINDING SITE FOR RESIDUE GSH C 202 source : AC7 52) chain C residue 13 type sequence G description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 53) chain C residue 14 type sequence R description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 54) chain C residue 36 type sequence Q description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 55) chain C residue 96 type sequence D description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 56) chain C residue 99 type sequence M description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 57) chain C residue 100 type sequence S description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 58) chain C residue 104 type sequence W description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 59) chain C residue 152 type sequence Y description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 60) chain C residue 155 type sequence I description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 61) chain C residue 199 type sequence L description BINDING SITE FOR RESIDUE 0O5 C 203 source : AC8 62) chain C residue 97 type sequence D description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 63) chain D residue 8 type sequence Y description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 64) chain D residue 14 type sequence R description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 65) chain D residue 39 type sequence W description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 66) chain D residue 43 type sequence K description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 67) chain D residue 50 type sequence K description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 68) chain D residue 51 type sequence I description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 69) chain D residue 63 type sequence Q description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 70) chain D residue 64 type sequence S description BINDING SITE FOR RESIDUE GSH D 201 source : AC9 71) chain D residue 8 type sequence Y description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 72) chain D residue 9 type sequence F description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 73) chain D residue 11 type sequence M description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 74) chain D residue 13 type sequence G description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 75) chain D residue 14 type sequence R description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 76) chain D residue 36 type sequence Q description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 77) chain D residue 96 type sequence D description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 78) chain D residue 99 type sequence M description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 79) chain D residue 104 type sequence W description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 80) chain D residue 152 type sequence Y description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 81) chain D residue 155 type sequence I description BINDING SITE FOR RESIDUE 0O5 D 202 source : BC1 82) chain A residue 8 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 83) chain B residue 63 type BINDING sequence Q description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 84) chain C residue 8 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 85) chain C residue 14 type BINDING sequence R description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 86) chain C residue 39 type BINDING sequence W description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 87) chain C residue 49 type BINDING sequence G description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 88) chain C residue 63 type BINDING sequence Q description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 89) chain D residue 8 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 90) chain D residue 14 type BINDING sequence R description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 91) chain D residue 39 type BINDING sequence W description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 92) chain D residue 49 type BINDING sequence G description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 93) chain A residue 14 type BINDING sequence R description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 94) chain D residue 63 type BINDING sequence Q description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 95) chain A residue 39 type BINDING sequence W description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 96) chain A residue 49 type BINDING sequence G description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 97) chain A residue 63 type BINDING sequence Q description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 98) chain B residue 8 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 99) chain B residue 14 type BINDING sequence R description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 100) chain B residue 39 type BINDING sequence W description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1 101) chain B residue 49 type BINDING sequence G description BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518 source Swiss-Prot : SWS_FT_FI1

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