eF-site ID 4ed8-APT
PDB Code 4ed8
Chain A, P, T

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Title Human DNA polymerase eta - DNA ternary complex: Reaction in the TG crystal at pH 7.0, Normal translocation
Classification TRANSFERASE/DNA
Compound DNA polymerase eta
Source Homo sapiens (Human) (4ED8)
Sequence A:  GPHMATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVV
QYKSWKGGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLL
AQVRESRGKANLTKYREASVEVMEIMSRFAVIERASIDEA
YVDLTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTVQ
KEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRA
AIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGS
VPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFT
ESQLQSHFGEKNGSWLYAMCRGIEHDPVKPRQLPKTIGCS
KNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRV
ATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTV
IKNCNTSGIQTEWSPPLTMLFLCATKFSAS
P:  TGCGTCATA
T:  ATTATGACGCG
Description


Functional site

1) chain A
residue 13
type
sequence D
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

2) chain A
residue 14
type
sequence M
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

3) chain A
residue 15
type
sequence D
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

4) chain A
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

5) chain A
residue 17
type
sequence F
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

6) chain A
residue 18
type
sequence F
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

7) chain A
residue 48
type
sequence I
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

8) chain A
residue 49
type
sequence A
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

9) chain A
residue 52
type
sequence Y
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

10) chain A
residue 55
type
sequence R
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

11) chain A
residue 61
type
sequence R
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

12) chain A
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

13) chain A
residue 231
type
sequence K
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

14) chain P
residue 9
type
sequence A
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

15) chain T
residue 2
type
sequence A
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

16) chain T
residue 3
type
sequence T
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

17) chain T
residue 4
type
sequence T
description BINDING SITE FOR RESIDUE DTP P 501
source : AC1

18) chain A
residue 13
type
sequence D
description BINDING SITE FOR RESIDUE MG A 502
source : AC2

19) chain A
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE MG A 502
source : AC2

20) chain A
residue 116
type
sequence E
description BINDING SITE FOR RESIDUE MG A 502
source : AC2

21) chain P
residue 9
type
sequence A
description BINDING SITE FOR RESIDUE MG A 502
source : AC2

22) chain A
residue 13
type
sequence D
description BINDING SITE FOR RESIDUE CA A 503
source : AC3

23) chain A
residue 14
type
sequence M
description BINDING SITE FOR RESIDUE CA A 503
source : AC3

24) chain A
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE CA A 503
source : AC3

25) chain A
residue 13
type
sequence D
description BINDING SITE FOR RESIDUE MG A 504
source : AC4

26) chain A
residue 14
type
sequence M
description BINDING SITE FOR RESIDUE MG A 504
source : AC4

27) chain A
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE MG A 504
source : AC4

28) chain A
residue 24
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 505
source : AC5

29) chain A
residue 244
type
sequence P
description BINDING SITE FOR RESIDUE GOL A 505
source : AC5

30) chain A
residue 248
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 505
source : AC5

31) chain A
residue 276
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 505
source : AC5

32) chain A
residue 277
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 505
source : AC5

33) chain A
residue 26
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 506
source : AC6

34) chain A
residue 27
type
sequence P
description BINDING SITE FOR RESIDUE GOL A 506
source : AC6

35) chain A
residue 28
type
sequence H
description BINDING SITE FOR RESIDUE GOL A 506
source : AC6

36) chain A
residue 271
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 506
source : AC6

37) chain A
residue 273
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 506
source : AC6

38) chain A
residue 274
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 506
source : AC6

39) chain A
residue 277
type
sequence E
description BINDING SITE FOR RESIDUE GOL A 506
source : AC6

40) chain A
residue 13
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:27284197, ECO:0007744|PDB:5KFO
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 14
type BINDING
sequence M
description BINDING => ECO:0000269|PubMed:27284197, ECO:0007744|PDB:5KFO
source Swiss-Prot : SWS_FT_FI1

42) chain A
residue 115
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:27284197, ECO:0007744|PDB:5KFO
source Swiss-Prot : SWS_FT_FI1

43) chain A
residue 116
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:27284197, ECO:0007744|PDB:5KFO
source Swiss-Prot : SWS_FT_FI1

44) chain A
residue 61
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27284197
source Swiss-Prot : SWS_FT_FI2


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