eF-site ID 4djj-AB
PDB Code 4djj
Chain A, B

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Title Crystal structure of the complex of Peptidyl-tRNA hydrolase from Pseudomonas aeruginosa with Pimelic acid at 2.9 Angstrom resolution
Classification HYDROLASE
Compound Peptidyl-tRNA hydrolase
Source Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (PTH_PSEAE)
Sequence A:  MTAVQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSL
VADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALA
GFFRIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRD
IIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQ
ELLDTSIDFALGVLPEMLAGDWTRAMQKLHSQKA
B:  MTAVQLIVGLGNPGPEYDQTRHNAGALFVERLAHAQGVSL
VADRKYFGLVGKFSHQGKDVRLLIPTTYMNRSGQSVAALA
GFFRIAPDAILVAHDELDMPPGVAKLKTGGGHGGHNGLRD
IIAQLGNQNSFHRLRLGIGHPGHSSLVSGYVLGRAPRSEQ
ELLDTSIDFALGVLPEMLAGDWTRAMQKLHSQKA
Description


Functional site

1) chain A
residue 22
type
sequence H
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

2) chain A
residue 95
type
sequence D
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

3) chain A
residue 96
type
sequence E
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

4) chain A
residue 97
type
sequence L
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

5) chain A
residue 113
type
sequence G
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

6) chain A
residue 114
type
sequence G
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

7) chain A
residue 115
type
sequence H
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

8) chain A
residue 116
type
sequence N
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

9) chain A
residue 151
type
sequence V
description BINDING SITE FOR RESIDUE PML A 201
source : AC1

10) chain B
residue 22
type
sequence H
description BINDING SITE FOR RESIDUE PML B 201
source : AC2

11) chain B
residue 95
type
sequence D
description BINDING SITE FOR RESIDUE PML B 201
source : AC2

12) chain B
residue 96
type
sequence E
description BINDING SITE FOR RESIDUE PML B 201
source : AC2

13) chain B
residue 97
type
sequence L
description BINDING SITE FOR RESIDUE PML B 201
source : AC2

14) chain B
residue 114
type
sequence G
description BINDING SITE FOR RESIDUE PML B 201
source : AC2

15) chain B
residue 115
type
sequence H
description BINDING SITE FOR RESIDUE PML B 201
source : AC2

16) chain B
residue 116
type
sequence N
description BINDING SITE FOR RESIDUE PML B 201
source : AC2

17) chain B
residue 151
type
sequence V
description BINDING SITE FOR RESIDUE PML B 201
source : AC2

18) chain A
residue 17-30
type prosite
sequence YDQTRHNAGALFVE
description PEPT_TRNA_HYDROL_1 Peptidyl-tRNA hydrolase signature 1. YdqTRHNaGalFVE
source prosite : PS01195

19) chain A
residue 111-121
type prosite
sequence GHGGHNGLRDI
description PEPT_TRNA_HYDROL_2 Peptidyl-tRNA hydrolase signature 2. GhggHNGLRDI
source prosite : PS01196


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