eF-site ID 4d6o-ADG
PDB Code 4d6o
Chain A, D, G

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Title THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 1H INCUBATION IN 5MM MG (STATE 2)
Classification HYDROLASE/DNA
Compound HOMING ENDONUCLEASE I-DMOI
Source Desulfurococcus mobilis (4D6O)
Sequence A:  NENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQK
SENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVS
SKKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLK
RLRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVL
NISLRDRIKFVHTILSSHLNPL
D:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLPPEAAALEHH
G:  VSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSEN
LIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSKK
LYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRLR
IWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNIS
LRDRIKFVHTILSSHL
Description


Functional site

1) chain G
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MG G 1183
source : AC1

2) chain G
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MG G 1183
source : AC1

3) chain A
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MG A 1186
source : AC2

4) chain A
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MG A 1186
source : AC2

5) chain D
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MG D 1196
source : AC3

6) chain D
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MG D 1196
source : AC3

7) chain A
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MG A 1187
source : AC4

8) chain A
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MG A 1187
source : AC4

9) chain D
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MG D 1197
source : AC5

10) chain D
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MG D 1197
source : AC5

11) chain G
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MG G 1184
source : AC6

12) chain G
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MG G 1184
source : AC6

13) chain D
residue 114
type
sequence Y
description BINDING SITE FOR RESIDUE ACT D 1198
source : AC7

14) chain D
residue 120
type
sequence K
description BINDING SITE FOR RESIDUE ACT D 1198
source : AC7

15) chain D
residue 186
type
sequence P
description BINDING SITE FOR RESIDUE ACT D 1198
source : AC7

16) chain D
residue 188
type
sequence E
description BINDING SITE FOR RESIDUE ACT D 1198
source : AC7

17) chain A
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

19) chain D
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

20) chain D
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

21) chain G
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

22) chain G
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1


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