eF-site ID 4d6n-ABCDEFGHIJKLMNO
PDB Code 4d6n
Chain A, B, C, D, E, F, G, H, I, J, K, L, M, N, O

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Title THE CRYSTAL STRUCTURE OF I-DMOI IN COMPLEX WITH ITS TARGET DNA AT 10 DAYS INCUBATION IN 5MM MG (STATE 7)
Classification HYDROLASE/DNA
Compound HOMING ENDONUCLEASE I-DMOI
Source Desulfurococcus mobilis (4D6N)
Sequence A:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLPP
B:  GCCTTGCCGGGTAA
C:  GTTCCGGCGCG
D:  CGCGCCGGAACTTAC
E:  CCGGCAAGGC
F:  ENVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKS
ENLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSS
KKLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKR
LRIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLN
ISLRDRIKFVHTILSSHLNPLPPEAAALEHH
G:  GCCTTGCCGGGTAA
H:  GTTCCGGCGCG
I:  CGCGCCGGAACTTAC
J:  CCGGCAAGGC
K:  NVSGISAYLLGLIIGDGGLYKLKYKGNRSEYRVVITQKSE
NLIKQHIAPLMQFLIDELNVKSKIQIVKGDTRYELRVSSK
KLYYYFANMLERIRLFNMREQIAFIKGLYVAEGDKTLKRL
RIWNKNKALLEIVSRWLNNLGVRNTIHLDDHRHGVYVLNI
SLRDRIKFVHTILSSHL
L:  GCCTTGCCGGGTAA
M:  GTTCCGGCGCG
N:  CGCGCCGGAACTTAC
O:  CCGGCAAGGC
Description


Functional site

1) chain A
residue 182
type
sequence L
description BINDING SITE FOR RESIDUE ACT A 1190
source : AC1

2) chain A
residue 183
type
sequence N
description BINDING SITE FOR RESIDUE ACT A 1190
source : AC1

3) chain A
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE ACT A 1191
source : AC2

4) chain F
residue 114
type
sequence Y
description BINDING SITE FOR RESIDUE ACT F 1198
source : AC3

5) chain F
residue 186
type
sequence P
description BINDING SITE FOR RESIDUE ACT F 1198
source : AC3

6) chain F
residue 188
type
sequence E
description BINDING SITE FOR RESIDUE ACT F 1198
source : AC3

7) chain A
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MG A 1188
source : AC4

8) chain A
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MG A 1188
source : AC4

9) chain A
residue 129
type
sequence N
description BINDING SITE FOR RESIDUE MG A 1188
source : AC4

10) chain C
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MG A 1188
source : AC4

11) chain D
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MG A 1188
source : AC4

12) chain K
residue 19
type
sequence I
description BINDING SITE FOR RESIDUE MG K 1183
source : AC5

13) chain K
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MG K 1183
source : AC5

14) chain K
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MG K 1183
source : AC5

15) chain M
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MG K 1183
source : AC5

16) chain N
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MG K 1183
source : AC5

17) chain A
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MG A 1189
source : AC6

18) chain A
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MG A 1189
source : AC6

19) chain B
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MG A 1189
source : AC6

20) chain E
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MG A 1189
source : AC6

21) chain F
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MG F 1196
source : AC7

22) chain F
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MG F 1196
source : AC7

23) chain F
residue 120
type
sequence K
description BINDING SITE FOR RESIDUE MG F 1196
source : AC7

24) chain G
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MG F 1196
source : AC7

25) chain J
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MG F 1196
source : AC7

26) chain F
residue 19
type
sequence I
description BINDING SITE FOR RESIDUE MG F 1197
source : AC8

27) chain F
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE MG F 1197
source : AC8

28) chain F
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MG F 1197
source : AC8

29) chain H
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE MG F 1197
source : AC8

30) chain I
residue 15
type
sequence C
description BINDING SITE FOR RESIDUE MG F 1197
source : AC8

31) chain K
residue 21
type
sequence D
description BINDING SITE FOR RESIDUE MG K 1184
source : AC9

32) chain K
residue 116
type
sequence A
description BINDING SITE FOR RESIDUE MG K 1184
source : AC9

33) chain K
residue 120
type
sequence K
description BINDING SITE FOR RESIDUE MG K 1184
source : AC9

34) chain L
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE MG K 1184
source : AC9

35) chain O
residue 16
type
sequence C
description BINDING SITE FOR RESIDUE MG K 1184
source : AC9

36) chain A
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

37) chain A
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

38) chain F
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

39) chain F
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

40) chain K
residue 21
type ACT_SITE
sequence D
description
source Swiss-Prot : SWS_FT_FI1

41) chain K
residue 117
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1


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