eF-site ID 4coo-A
PDB Code 4coo
Chain A

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Title Crystal structure of human cystathionine beta-synthase (delta516-525) at 2.0 angstrom resolution
Classification LYASE
Compound CYSTATHIONINE BETA-SYNTHASE
Source Homo sapiens (Human) (CBS_HUMAN)
Sequence A:  WIRPDAPSRCTWQLGRPASESPHHHTAPAKSPKILPDILK
KIGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGSVKDRI
SLRMIEDAERDGTLKPGDTIIEPTSGNTGIGLALAAAVRG
YRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPES
HVGVAWRLKNEIPNSHILDQYRNASNPLAHYDTTADEILQ
QCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP
EGSILAEPEELNQTEQTTYEVEGIGYDFIPTVLDRTVVDK
WFKSNDEEAFTFARMLIAQEGLLCGGSAGSTVAVAVKAAQ
ELQEGQRCVVILPDSVRNYMTKFLSDRWMLQKGFLKEEDL
TEKKPWWWHLRVQELGLSAPLTVLPTITCGHTIEILREKG
FDQAPVVDEAGVILGMVTLGNMLSSLLAGKVQPSDQVGKV
IYKQFKQIRLTDTLGRLSHILEMDHFALVVHEQMVFGVVT
AIDLLNFVAAQER
Description


Functional site

1) chain A
residue 50
type
sequence S
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

2) chain A
residue 51
type
sequence R
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

3) chain A
residue 52
type
sequence C
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

4) chain A
residue 53
type
sequence T
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

5) chain A
residue 54
type
sequence W
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

6) chain A
residue 62
type
sequence E
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

7) chain A
residue 63
type
sequence S
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

8) chain A
residue 64
type
sequence P
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

9) chain A
residue 65
type
sequence H
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

10) chain A
residue 224
type
sequence R
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

11) chain A
residue 226
type
sequence A
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

12) chain A
residue 230
type
sequence L
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

13) chain A
residue 233
type
sequence Y
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

14) chain A
residue 266
type
sequence R
description BINDING SITE FOR RESIDUE HEM A 1549
source : AC1

15) chain A
residue 119
type
sequence K
description BINDING SITE FOR RESIDUE ACT A 1550
source : AC3

16) chain A
residue 146
type
sequence T
description BINDING SITE FOR RESIDUE ACT A 1550
source : AC3

17) chain A
residue 147
type
sequence S
description BINDING SITE FOR RESIDUE ACT A 1550
source : AC3

18) chain A
residue 149
type
sequence N
description BINDING SITE FOR RESIDUE ACT A 1550
source : AC3

19) chain A
residue 150
type
sequence T
description BINDING SITE FOR RESIDUE ACT A 1550
source : AC3

20) chain A
residue 222
type
sequence Q
description BINDING SITE FOR RESIDUE ACT A 1550
source : AC3

21) chain A
residue 119
type
sequence K
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

22) chain A
residue 149
type
sequence N
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

23) chain A
residue 254
type
sequence S
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

24) chain A
residue 255
type
sequence V
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

25) chain A
residue 256
type
sequence G
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

26) chain A
residue 257
type
sequence T
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

27) chain A
residue 258
type
sequence G
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

28) chain A
residue 259
type
sequence G
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

29) chain A
residue 260
type
sequence T
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

30) chain A
residue 305
type
sequence G
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

31) chain A
residue 306
type
sequence I
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

32) chain A
residue 349
type
sequence S
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

33) chain A
residue 375
type
sequence P
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

34) chain A
residue 376
type
sequence D
description BINDING SITE FOR RESIDUE PLP A 1551
source : AC7

35) chain A
residue 50
type
sequence S
description BINDING SITE FOR RESIDUE EDO A 1552
source : AC9

36) chain A
residue 229
type
sequence P
description BINDING SITE FOR RESIDUE EDO A 1552
source : AC9

37) chain A
residue 262
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 1552
source : AC9

38) chain A
residue 266
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 1552
source : AC9

39) chain A
residue 313
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 1552
source : AC9

40) chain A
residue 314
type
sequence V
description BINDING SITE FOR RESIDUE EDO A 1552
source : AC9

41) chain A
residue 195
type
sequence A
description BINDING SITE FOR RESIDUE EDO A 1553
source : BC1

42) chain A
residue 197
type
sequence F
description BINDING SITE FOR RESIDUE EDO A 1553
source : BC1

43) chain A
residue 202
type
sequence S
description BINDING SITE FOR RESIDUE EDO A 1553
source : BC1

44) chain A
residue 203
type
sequence H
description BINDING SITE FOR RESIDUE EDO A 1553
source : BC1

45) chain A
residue 308
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 1553
source : BC1

46) chain A
residue 309
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 1553
source : BC1

47) chain A
residue 187
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 1554
source : BC3

48) chain A
residue 485
type
sequence K
description BINDING SITE FOR RESIDUE EDO A 1555
source : BC4

49) chain A
residue 486
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 1555
source : BC4

50) chain A
residue 487
type
sequence F
description BINDING SITE FOR RESIDUE EDO A 1555
source : BC4

51) chain A
residue 315
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 1556
source : BC5

52) chain A
residue 316
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 1556
source : BC5

53) chain A
residue 317
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 1556
source : BC5

54) chain A
residue 198
type
sequence D
description BINDING SITE FOR RESIDUE PE4 A 1557
source : BC6

55) chain A
residue 200
type
sequence P
description BINDING SITE FOR RESIDUE PE4 A 1557
source : BC6

56) chain A
residue 436
type
sequence E
description BINDING SITE FOR RESIDUE PE4 A 1557
source : BC6

57) chain A
residue 439
type
sequence R
description BINDING SITE FOR RESIDUE PE4 A 1557
source : BC6

58) chain A
residue 172
type
sequence K
description BINDING SITE FOR RESIDUE NA A 1558
source : BC7

59) chain A
residue 173
type
sequence M
description BINDING SITE FOR RESIDUE NA A 1558
source : BC7

60) chain A
residue 305
type
sequence G
description BINDING SITE FOR RESIDUE NA A 1558
source : BC7

61) chain A
residue 306
type
sequence I
description BINDING SITE FOR RESIDUE NA A 1558
source : BC7

62) chain A
residue 188
type
sequence I
description BINDING SITE FOR RESIDUE ACT B 1546
source : BC9

63) chain A
residue 189
type
sequence V
description BINDING SITE FOR RESIDUE ACT B 1546
source : BC9

64) chain A
residue 539
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 1559
source : CC1

65) chain A
residue 540
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 1559
source : CC1

66) chain A
residue 108-126
type prosite
sequence KCEFFNAGGSVKDRISLRM
description CYS_SYNTHASE Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. KcEffn.AGgSVKdRiSlrM
source prosite : PS00901

67) chain A
residue 211
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO) => ECO:0000269|PubMed:17087506
source Swiss-Prot : SWS_FT_FI6

68) chain A
residue 52
type BINDING
sequence C
description axial binding residue => ECO:0000269|PubMed:11483494, ECO:0000269|PubMed:12173932
source Swiss-Prot : SWS_FT_FI1

69) chain A
residue 65
type BINDING
sequence H
description axial binding residue => ECO:0000269|PubMed:11483494, ECO:0000269|PubMed:12173932
source Swiss-Prot : SWS_FT_FI1

70) chain A
residue 149
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:11483494, ECO:0000269|PubMed:12173932
source Swiss-Prot : SWS_FT_FI2

71) chain A
residue 256
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:11483494, ECO:0000269|PubMed:12173932
source Swiss-Prot : SWS_FT_FI2

72) chain A
residue 349
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:11483494, ECO:0000269|PubMed:12173932
source Swiss-Prot : SWS_FT_FI2

73) chain A
residue 119
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine => ECO:0000269|PubMed:11483494, ECO:0000269|PubMed:12173932
source Swiss-Prot : SWS_FT_FI4

74) chain A
residue 199
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI5

75) chain A
residue 119
type catalytic
sequence K
description 713
source MCSA : MCSA1


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