|
eF-site ID
|
4c3h-I |
PDB Code
|
4c3h |
Chain
|
I |
|
click to enlarge
|
|
Title
|
Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93 |
Classification
|
TRANSCRIPTION |
Compound
|
DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190 |
Source
|
ORGANISM_COMMON: BAKER'S YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; |
|
Sequence
|
I: |
SVVGSLIFCLDCGDLLENPNAVLGSNVECSQCKAIYPKSQ
FSNLKVVTTTADDAFPSSLRAKKSVVKTSLKKNELKDGAT
IKEKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKF
RTNN
|
|
Description
|
(1) |
DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5, DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA34
|
|
Functional site
|
|
1)
|
chain |
I |
residue |
10 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN I 1126
|
source |
: AC6
|
|
2)
|
chain |
I |
residue |
13 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN I 1126
|
source |
: AC6
|
|
3)
|
chain |
I |
residue |
30 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN I 1126
|
source |
: AC6
|
|
4)
|
chain |
I |
residue |
33 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN I 1126
|
source |
: AC6
|
|
5)
|
chain |
I |
residue |
86 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN I 1127
|
source |
: AC7
|
|
6)
|
chain |
I |
residue |
89 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN I 1127
|
source |
: AC7
|
|
7)
|
chain |
I |
residue |
114 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN I 1127
|
source |
: AC7
|
|
8)
|
chain |
I |
residue |
117 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN I 1127
|
source |
: AC7
|
|
9)
|
chain |
I |
residue |
89 |
type |
MOD_RES |
sequence |
C
|
description |
Phosphoserine => ECO:0007744|PubMed:18407956
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
10)
|
chain |
I |
residue |
114 |
type |
MOD_RES |
sequence |
C
|
description |
Phosphoserine => ECO:0007744|PubMed:18407956
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
11)
|
chain |
I |
residue |
117 |
type |
MOD_RES |
sequence |
C
|
description |
Phosphoserine => ECO:0007744|PubMed:18407956
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
12)
|
chain |
I |
residue |
86-121 |
type |
prosite |
sequence |
CPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKF
|
description |
ZF_TFIIS_1 Zinc finger TFIIS-type signature. CpqCgneemnyhtLQLRSaDEGatvfytCts...CgykF
|
source |
prosite : PS00466
|
|
13)
|
chain |
I |
residue |
9-33 |
type |
prosite |
sequence |
FCLDCGDLLENPNAVLGSNVECSQC
|
description |
RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FClDCGDLLenpnavlgsnve..CsqC
|
source |
prosite : PS01030
|
|
|
|