eF-site ID 4c3h-B
PDB Code 4c3h
Chain B

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Title Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93
Classification TRANSCRIPTION
Compound DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190
Source ORGANISM_COMMON: BAKER'S YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
Sequence B:  RTADFRTLERESRFINPPKDKSAFPLLQEAVQPHIGSFNA
LTEGPDGGLLNLGVKDIGEKVIFDGKPLNSEEISNSGYLG
NKLSVSVEQVSIAKPMSNDSAVERKVYPSESRQRLTSYRG
KLLLKLKWSVNNGEENLFEVRDCGGLPVMLQSNRCHLNKM
SPYELVQHKEESDEIGGYFIVNGIEKLIRMLIVQRRNHPM
AIIRPSFANRGASYSHYGIQIRSVRPDQTSQTNVLHYLND
GQVTFRFSWRKNEYLVPVVMILKALCHTSDREIFDGIIGN
DVKDSFLTDRLELLLRGFKKRYPHLQNRTQVLQYLGDKFR
VVFQASPDQSDLEVGQEVLDRIVLVHLGKDGSQDKFRMLL
FMIRKLYSLVAGECSPDNPDATQHQEVLLGGFLYGMILKE
KIDEYLQNIIAQVRMDINRGMAINFKDKRYMSRVLMRVNE
NIGSKMQYFLSTGNLVSQSGLDLQQVSGYTVVAEKINFYR
FISHFRMVHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPD
GSPCGLLNHFAHKCRISTQQSDVSRIPSILYSLGVAPASH
TFAAGPSLCCVQIDGKIIGWVSHEQGKIIADTLRYWKVEG
KTPGLPIDLEIGYVPPSTRGQYPGLYLFGGHSRMLRPVRY
LPLDKEDIVGPFEQVYMNIAVTPQEIQNNVHTHVEFTPTN
ILSILANLTPFSDFNQSPRNMYQCQMGKQTMGTPGVALCH
RSDNKLYRLQTGQTPIVKANLYDDYGMDNFPNGFNAVVAV
ISYTGYDMDDAMIINKSADERGFGYGTMYKTEKVDLALDP
ITQHFGFGNDEWPKEWLEKLDEDGLPYIGTYVEEGDPICA
YFDDTLNKTKIKTYHSSEPAYIEEVNLIGDESNKFQELQT
VSIKYRIRRTPQIGDKFSSRHGQKGVCSRKWPTIDMPFSE
TGIQPDIIINPHAFPSRMTIGMFVESLAGKAGALHGIAQD
STPWIFNEDDTPADYFGEQLAKAGYNYHGNEPMYSGATGE
ELRADIYVGVVYYQRLRHMVNDKFQVRSTGPVNSLTMQPV
KGRKRHGGIRVGEMERDALIGHGTSFLLQDRLLNSSDYTQ
ASVCRECGSILTTQQSVPRIGSISTVCCRRCSMRFEDAKK
GEKIFIDDSQIWEDGQGNKFVGGNETTTVAIPFVLKYLDS
ELSAMGIRLRYNVEPK
Description (1)  DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA190 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5, DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA34


Functional site

1) chain B
residue 1104
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2204
source : AC3

2) chain B
residue 1107
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2204
source : AC3

3) chain B
residue 1128
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2204
source : AC3

4) chain B
residue 1131
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2204
source : AC3

5) chain B
residue 1156
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI4

6) chain B
residue 914-926
type prosite
sequence GDKFSSRHGQKGV
description RNA_POL_BETA RNA polymerases beta chain signature. GdKFSSrHGQKGV
source prosite : PS01166


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