eF-site ID 4a5w-B
PDB Code 4a5w
Chain B

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Title Crystal structure of C5b6
Classification IMMUNE SYSTEM
Compound COMPLEMENT C5
Source ORGANISM_COMMON: HUMAN; ORGANISM_SCIENTIFIC: HOMO SAPIENS;
Sequence B:  CFCDHYAWTQWTSCSKTCNSGTQSRHRQIVVDKYYQENFC
EQICSKQETRECNWQRCPINCLLGDFGPWSDCDPCIEKQS
KVRSVLRPSQFGGQPCTAPLVAFQPCIPSKLCKIEEADCK
NKFRCDSGRCIARKLECNGENDCGDNSDERDCGRTKAVCT
RKYNPIPSVQLMGNGFHFLAGEPRGEVLDNSFTGGICKTV
KSSRTSNPYRVPANLENVGFEVQTAEDDLKTDFYKDLTSL
QGGSSFSVPIFYSSKRSENINHNSAFKQAIQASHKKDSSF
IRIHKVMKVLNFTTKAKDLHLSDVFLKALNHLPLEYNSAL
YSRIFDDFGTHYFTSGSLGGVYDLLYQFSSEELKNSGLTE
EEAKHCVRIETHRCTTNKLSEKHEGSFIQGAEKSISLIRG
GEEKTFSEWLESVKENPAVIDFELAPIVDLVRNIPCAVTK
RNNLRKALQEYAAKFDPCQCAPCPNNGRPTLSGTECLCVC
QSGTYGENCEKQSPDYKSNAVDGQWGCWSSWSTCDATYKR
SRTRECNNPAPQRGGKRCEGEKRQEEDCTFSIMENNGQPC
INDDEEMKEVDLPEIEADSGCPQPVPPENGFIRNEKQLYL
VGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTE
CIKPVVQEVLTITPFQRLYRIGESIELTCPKGFVVAGPSR
YTCQGNSWTPPISNSLTCEKDTLTKLKGHCQLGQKQSGSE
CICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKC
LNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCG
YDTCYDWEKCSASTSKCVCLLPPQCFKGGNQLYCVKMGSS
TSEKTLNICEVGTIRCANRKMEILHPGKCLA
Description


Functional site

1) chain B
residue 541-552
type prosite
sequence CVCQSGTYGENC
description EGF_1 EGF-like domain signature 1. CvCqsGtyGEnC
source prosite : PS00022

2) chain B
residue 354-365
type prosite
sequence YSRIFDDFGTHY
description MACPF_1 Membrane attack complex/perforin (MACPF) domain signature. YsrifddFGTHY
source prosite : PS00279

3) chain B
residue 151-173
type prosite
sequence CIARKLECNGENDCGDNSDERDC
description LDLRA_1 LDL-receptor class A (LDLRA) domain signature. CIarkle.CNgenDCgdn.SDErd...C
source prosite : PS01209

4) chain B
residue 855
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952
source Swiss-Prot : SWS_FT_FI5

5) chain B
residue 29
type CARBOHYD
sequence W
description C-linked (Man) tryptophan => ECO:0000269|PubMed:10551839
source Swiss-Prot : SWS_FT_FI1

6) chain B
residue 32
type CARBOHYD
sequence W
description C-linked (Man) tryptophan; partial => ECO:0000269|PubMed:10551839
source Swiss-Prot : SWS_FT_FI2

7) chain B
residue 90
type CARBOHYD
sequence W
description C-linked (Man) tryptophan; partial => ECO:0000269|PubMed:10551839
source Swiss-Prot : SWS_FT_FI2

8) chain B
residue 568
type CARBOHYD
sequence W
description C-linked (Man) tryptophan; partial => ECO:0000269|PubMed:10551839
source Swiss-Prot : SWS_FT_FI2

9) chain B
residue 571
type CARBOHYD
sequence W
description C-linked (Man) tryptophan; partial => ECO:0000269|PubMed:10551839
source Swiss-Prot : SWS_FT_FI2

10) chain B
residue 574
type CARBOHYD
sequence W
description C-linked (Man) tryptophan; partial => ECO:0000269|PubMed:10551839
source Swiss-Prot : SWS_FT_FI2

11) chain B
residue 38
type CARBOHYD
sequence T
description O-linked (Fuc...) threonine => ECO:0000305|PubMed:22267737
source Swiss-Prot : SWS_FT_FI3

12) chain B
residue 392
type CARBOHYD
sequence T
description O-linked (Fuc...) threonine => ECO:0000305|PubMed:22267737
source Swiss-Prot : SWS_FT_FI3

13) chain B
residue 324
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:22267737
source Swiss-Prot : SWS_FT_FI4


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