eF-site ID 4a3q-B
PDB Code 4a3q
Chain B

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Title The 2.15 Angstrom resolution crystal structure of Staphylococcus aureus alanine racemase
Classification ISOMERASE
Compound ALANINE RACEMASE 1
Source Staphylococcus aureus (strain Mu50 / ATCC 700699) (ALR1_STAAM)
Sequence B:  SDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKAN
AYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAK
ILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGE
QEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLV
FEGVFTHFTTEQYQRFKDMVNEAIKPEYIHCQNSAGSLLM
DCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIAN
VVQTKTLPTTIALLPIGYADGYLRIMQGSFVNVNGHQCEV
IGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVA
EKQHTINYEVLCNLSRRLPRIYHDGDQRFVTNELLK
Description


Functional site

1) chain B
residue 314
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 1388
source : AC7

2) chain B
residue 39
type
sequence K
description BINDING SITE FOR RESIDUE ACT A 1389
source : AC8

3) chain B
residue 39
type
sequence K
description BINDING SITE FOR RESIDUE PLP B 1039
source : AC9

4) chain B
residue 43
type
sequence Y
description BINDING SITE FOR RESIDUE PLP B 1039
source : AC9

5) chain B
residue 168
type
sequence H
description BINDING SITE FOR RESIDUE PLP B 1039
source : AC9

6) chain B
residue 204
type
sequence S
description BINDING SITE FOR RESIDUE PLP B 1039
source : AC9

7) chain B
residue 219
type
sequence R
description BINDING SITE FOR RESIDUE PLP B 1039
source : AC9

8) chain B
residue 221
type
sequence G
description BINDING SITE FOR RESIDUE PLP B 1039
source : AC9

9) chain B
residue 222
type
sequence I
description BINDING SITE FOR RESIDUE PLP B 1039
source : AC9

10) chain B
residue 354
type
sequence Y
description BINDING SITE FOR RESIDUE PLP B 1039
source : AC9

11) chain B
residue 228
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 B 1383
source : BC1

12) chain B
residue 234
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 B 1383
source : BC1

13) chain B
residue 240
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 1383
source : BC1

14) chain B
residue 241
type
sequence L
description BINDING SITE FOR RESIDUE SO4 B 1383
source : BC1

15) chain B
residue 336
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1383
source : BC1

16) chain B
residue 49
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 1384
source : BC2

17) chain B
residue 52
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1384
source : BC2

18) chain B
residue 76
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 1384
source : BC2

19) chain B
residue 360
type
sequence L
description BINDING SITE FOR RESIDUE SO4 B 1385
source : BC3

20) chain B
residue 361
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 1385
source : BC3

21) chain B
residue 362
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1385
source : BC3

22) chain B
residue 107
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 1386
source : BC4

23) chain B
residue 108
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 1386
source : BC4

24) chain B
residue 109
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 B 1386
source : BC4

25) chain B
residue 335
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 1387
source : BC5

26) chain B
residue 336
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1387
source : BC5

27) chain B
residue 337
type
sequence E
description BINDING SITE FOR RESIDUE SO4 B 1387
source : BC5

28) chain B
residue 29
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 1388
source : BC6

29) chain B
residue 30
type
sequence P
description BINDING SITE FOR RESIDUE SO4 B 1388
source : BC6

30) chain B
residue 31
type
sequence N
description BINDING SITE FOR RESIDUE SO4 B 1388
source : BC6

31) chain B
residue 32
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 1388
source : BC6

32) chain B
residue 211
type
sequence D
description BINDING SITE FOR RESIDUE SO4 B 1388
source : BC6

33) chain B
residue 213
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 B 1388
source : BC6

34) chain B
residue 131
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 1389
source : BC7

35) chain B
residue 138
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1389
source : BC7

36) chain B
residue 139
type
sequence L
description BINDING SITE FOR RESIDUE SO4 B 1389
source : BC7

37) chain B
residue 168
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 1389
source : BC7

38) chain B
residue 284
type
sequence Y
description BINDING SITE FOR RESIDUE ACT B 1390
source : BC8

39) chain B
residue 311
type
sequence C
description BINDING SITE FOR RESIDUE ACT B 1390
source : BC8

40) chain B
residue 312
type
sequence M
description BINDING SITE FOR RESIDUE ACT B 1390
source : BC8

41) chain B
residue 39
type ACT_SITE
sequence K
description Proton acceptor; specific for D-alanine => ECO:0000305|PubMed:22194336
source Swiss-Prot : SWS_FT_FI1

42) chain B
residue 138
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI3

43) chain B
residue 312
type BINDING
sequence M
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI4

44) chain B
residue 39
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine
source Swiss-Prot : SWS_FT_FI5


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