eF-site ID 4a3q-A
PDB Code 4a3q
Chain A

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Title The 2.15 Angstrom resolution crystal structure of Staphylococcus aureus alanine racemase
Classification ISOMERASE
Compound ALANINE RACEMASE 1
Source Staphylococcus aureus (strain Mu50 / ATCC 700699) (ALR1_STAAM)
Sequence A:  SDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKAN
AYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAK
ILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGE
QEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLV
FEGVFTHFDMTTEQYQRFKDMVNEAIKPEYIHCQNSAGSL
LMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLI
ANVVQTKTTTIALLPIGYADGYLRIMQGSFVNVNGHQCEV
IGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVA
EKQHTINYEVLCNLSRRLPRIYHDGDQRFVTNELLK
Description


Functional site

1) chain A
residue 39
type
sequence K
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

2) chain A
residue 43
type
sequence Y
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

3) chain A
residue 168
type
sequence H
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

4) chain A
residue 203
type
sequence N
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

5) chain A
residue 204
type
sequence S
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

6) chain A
residue 219
type
sequence R
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

7) chain A
residue 221
type
sequence G
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

8) chain A
residue 222
type
sequence I
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

9) chain A
residue 354
type
sequence Y
description BINDING SITE FOR RESIDUE PLP A 1039
source : AC1

10) chain A
residue 228
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 A 1383
source : AC2

11) chain A
residue 234
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 1383
source : AC2

12) chain A
residue 240
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 1383
source : AC2

13) chain A
residue 241
type
sequence L
description BINDING SITE FOR RESIDUE SO4 A 1383
source : AC2

14) chain A
residue 336
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1383
source : AC2

15) chain A
residue 107
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 1384
source : AC3

16) chain A
residue 108
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1384
source : AC3

17) chain A
residue 109
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 1384
source : AC3

18) chain A
residue 146
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 1384
source : AC3

19) chain A
residue 48
type
sequence V
description BINDING SITE FOR RESIDUE SO4 A 1385
source : AC4

20) chain A
residue 49
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1385
source : AC4

21) chain A
residue 52
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1385
source : AC4

22) chain A
residue 76
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 1385
source : AC4

23) chain A
residue 335
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 1386
source : AC5

24) chain A
residue 336
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1386
source : AC5

25) chain A
residue 337
type
sequence E
description BINDING SITE FOR RESIDUE SO4 A 1386
source : AC5

26) chain A
residue 29
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 1387
source : AC6

27) chain A
residue 30
type
sequence P
description BINDING SITE FOR RESIDUE SO4 A 1387
source : AC6

28) chain A
residue 31
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 1387
source : AC6

29) chain A
residue 32
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1387
source : AC6

30) chain A
residue 131
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 1388
source : AC7

31) chain A
residue 138
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1388
source : AC7

32) chain A
residue 139
type
sequence L
description BINDING SITE FOR RESIDUE SO4 A 1388
source : AC7

33) chain A
residue 168
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 1388
source : AC7

34) chain A
residue 311
type
sequence C
description BINDING SITE FOR RESIDUE ACT A 1389
source : AC8

35) chain A
residue 312
type
sequence M
description BINDING SITE FOR RESIDUE ACT A 1389
source : AC8

36) chain A
residue 361
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 1385
source : BC3

37) chain A
residue 362
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 1385
source : BC3

38) chain A
residue 108
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 1388
source : BC6

39) chain A
residue 112
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 1388
source : BC6

40) chain A
residue 39
type
sequence K
description BINDING SITE FOR RESIDUE ACT B 1390
source : BC8

41) chain A
residue 354
type
sequence Y
description BINDING SITE FOR RESIDUE ACT B 1390
source : BC8

42) chain A
residue 138
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI3

43) chain A
residue 39
type ACT_SITE
sequence K
description Proton acceptor; specific for D-alanine => ECO:0000305|PubMed:22194336
source Swiss-Prot : SWS_FT_FI1

44) chain A
residue 36-46
type prosite
sequence AVVKANAYGLG
description ALANINE_RACEMASE Alanine racemase pyridoxal-phosphate attachment site. AVvKANAYGLG
source prosite : PS00395

45) chain A
residue 39
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine
source Swiss-Prot : SWS_FT_FI5

46) chain A
residue 312
type BINDING
sequence M
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI4


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