eF-site ID 4a3g-L
PDB Code 4a3g
Chain L

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Title RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid
Classification TRANSCRIPTION
Compound DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
Source ORGANISM_COMMON: BAKER'S YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
Sequence L:  ATLKYICAECSSKLSLSRTDAVRCKDCGHRILLKARTKRL
VQFEAR
Description (1)  DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2, RPB7, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4


Functional site

1) chain L
residue 31
type
sequence C
description BINDING SITE FOR RESIDUE ZN L 1071
source : AC9

2) chain L
residue 34
type
sequence C
description BINDING SITE FOR RESIDUE ZN L 1071
source : AC9

3) chain L
residue 48
type
sequence C
description BINDING SITE FOR RESIDUE ZN L 1071
source : AC9

4) chain L
residue 51
type
sequence C
description BINDING SITE FOR RESIDUE ZN L 1071
source : AC9

5) chain L
residue 31-51
type ZN_FING
sequence CAECSSKLSLSRTDAVRCKDC
description C4-type
source Swiss-Prot : SWS_FT_FI1

6) chain L
residue 31
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI2

7) chain L
residue 34
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI2

8) chain L
residue 48
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI2

9) chain L
residue 51
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI2


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