eF-site ID 4a3f-NPT
PDB Code 4a3f
Chain N, P, T

click to enlarge
Title RNA Polymerase II initial transcribing complex with a 6nt DNA-RNA hybrid and soaked with AMPCPP
Classification TRANSCRIPTION
Compound DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1
Source ORGANISM_COMMON: BAKER'S YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
Sequence N:  AAGTACTTGAG
P:  CCAGGA
T:  CTCAAGTACTTTTTCCXGGT
Description (1)  DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2 (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB4, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 1, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2, RPB7, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 3, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB9, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 5, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 4


Functional site

1) chain P
residue 10
type
sequence A
description BINDING SITE FOR RESIDUE APC A 2455
source : AC1

2) chain T
residue 18
type
sequence T
description BINDING SITE FOR RESIDUE APC A 2455
source : AC1

3) chain T
residue 19
type
sequence T
description BINDING SITE FOR RESIDUE APC A 2455
source : AC1

4) chain P
residue 10
type
sequence A
description BINDING SITE FOR RESIDUE MG A 2458
source : AC4


Display surface

Download
Links