eF-site ID 3zts-ABCDEFGHIJKL
PDB Code 3zts
Chain A, B, C, D, E, F, G, H, I, J, K, L

click to enlarge
Title Hexagonal form P6122 of the Aquifex aeolicus nucleoside diphosphate kinase (FINAL STAGE OF RADIATION DAMAGE)
Classification TRANSFERASE
Compound NUCLEOSIDE DIPHOSPHATE KINASE
Source Aquifex aeolicus (strain VF5) (NDK_AQUAE)
Sequence A:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
B:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
C:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
D:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
E:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
F:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
G:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
H:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
I:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
J:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
K:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
L:  AVERTLIIVKPDAMEKGALGKILDRFIQEGFQIKALKMFR
FTPEKAGEFYYVHRERPFFQELVEFMSSGPVVAAVLEGED
AIKRVREIIGPTDSEEARKVAPNSIRAQFGTDKGKNAIHA
SDSPESAQYEICFIFSGLEIV
Description


Functional site

1) chain A
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

2) chain J
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

3) chain K
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

4) chain L
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

5) chain B
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

6) chain C
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

7) chain D
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

8) chain E
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

9) chain F
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

10) chain G
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

11) chain H
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

12) chain I
residue 120
type ACT_SITE
sequence H
description Pros-phosphohistidine intermediate => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

14) chain B
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

15) chain B
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

16) chain B
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

17) chain C
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

18) chain C
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

19) chain C
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

20) chain C
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

21) chain C
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

22) chain C
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

23) chain D
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

24) chain A
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

25) chain D
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

26) chain D
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

27) chain D
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

28) chain D
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

29) chain D
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

30) chain E
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

31) chain E
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

32) chain E
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

33) chain E
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

34) chain E
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

35) chain A
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

36) chain E
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

37) chain F
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

38) chain F
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

39) chain F
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

40) chain F
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

41) chain F
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

42) chain F
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

43) chain G
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

44) chain G
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

45) chain G
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

46) chain A
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

47) chain G
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

48) chain G
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

49) chain G
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

50) chain H
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

51) chain H
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

52) chain H
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

53) chain H
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

54) chain H
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

55) chain H
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

56) chain I
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

57) chain A
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

58) chain I
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

59) chain I
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

60) chain I
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

61) chain I
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

62) chain I
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

63) chain J
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

64) chain J
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

65) chain J
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

66) chain J
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

67) chain J
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

68) chain A
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

69) chain J
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

70) chain K
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

71) chain K
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

72) chain K
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

73) chain K
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

74) chain K
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

75) chain K
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

76) chain L
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

77) chain L
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

78) chain L
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

79) chain B
residue 11
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

80) chain L
residue 93
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

81) chain L
residue 107
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

82) chain L
residue 117
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

83) chain B
residue 59
type BINDING
sequence F
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

84) chain B
residue 87
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_00451
source Swiss-Prot : SWS_FT_FI2

85) chain A
residue 117-125
type prosite
sequence NAIHASDSP
description NDP_KINASES Nucleoside diphosphate kinases active site. NaiHASDSP
source prosite : PS00469


Display surface

Download
Links