eF-site ID 3ztj-ABCDEFGHIJKL
PDB Code 3ztj
Chain A, B, C, D, E, F, G, H, I, J, K, L

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Title Structure of influenza A neutralizing antibody selected from cultures of single human plasma cells in complex with human H3 Influenza haemagglutinin.
Classification IMMUNE SYSTEM/VIRAL PROTEIN
Compound HEMAGGLUTININ HA1 CHAIN
Source ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS;
Sequence A:  STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSST
GKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFV
ERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWT
GVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTM
PNNDNFDKLYIWGIHHPSTNQEQTSLYVQASGRVTVSTRR
SQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSN
GNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSI
PNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEK
B:  GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKS
TQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDL
EKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFE
KTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDHD
VYRDEALNNRFQ
C:  STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSST
GKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFV
ERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWT
GVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTM
PNNDNFDKLYIWGIHHPSTNQEQTSLYVQASGRVTVSTRR
SQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSN
GNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSI
PNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVP
D:  GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKS
TQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDL
EKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFE
KTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDHD
VYRDEALNNRFQ
E:  STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSST
GKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFV
ERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWT
GVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTM
PNNDNFDKLYIWGIHHPSTNQEQTSLYVQASGRVTVSTRR
SQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSN
GNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSI
PNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEK
F:  GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKS
TQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDL
EKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFE
KTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDHD
VYRDEALNNRFQ
G:  QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQA
PGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLY
LQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWG
QGTLVTVSS
H:  DIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWY
QQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTIS
SLQAEDVAVYYCQQHYRTPPTFGQGTK
I:  QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQA
PGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLY
LQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWG
QGTLVTVSSASTKGPSVFPLAPSSGGTAALGCLVKDYFPE
PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSS
LGTQTYICNVNHKPSNTKVDKRVEPK
J:  DIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWY
QQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTIS
SLQAEDVAVYYCQQHYRTPPTFGQGTKVEIKRTVAAPSVF
IFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEV
THQGLSSPVTKSFNRG
K:  QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQA
PGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLY
LQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWG
QGTLVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPV
TVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG
TQTYICNVNHKPSNTKVDKRVEPK
L:  DIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWY
QQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTIS
SLQAEDVAVYYCQQHYRTPPTFGQGTKVEIKRTVAAPSVF
IFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEV
THQGLSSPVTKSFNRG
Description (1)  HEMAGGLUTININ HA1 CHAIN, HEMAGGLUTININ HA2 CHAIN, FI6V3 ANTIBODY HEAVY CHAIN, FI6V3 ANTIBODY LIGHT CHAIN


Functional site

1) chain B
residue 154
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI1

2) chain D
residue 154
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI1

3) chain F
residue 154
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI1

4) chain C
residue 81
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

5) chain C
residue 165
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

6) chain C
residue 285
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

7) chain E
residue 22
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

8) chain E
residue 38
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

9) chain E
residue 81
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

10) chain E
residue 165
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

11) chain E
residue 285
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

12) chain A
residue 22
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

13) chain A
residue 38
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

14) chain A
residue 81
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

15) chain A
residue 165
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 285
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

17) chain C
residue 22
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2

18) chain C
residue 38
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04072
source Swiss-Prot : SWS_FT_FI2


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