eF-site ID 3znz-A
PDB Code 3znz
Chain A

click to enlarge
Title Crystal structure of OTULIN OTU domain (C129A) in complex with Met1- di ubiquitin
Classification HYDROLASE
Compound PROTEIN FAM105B
Source null (F5H265_HUMAN)
Sequence A:  GPLSVAPEMDIMDYCKKEWRGNTQKATCMKMGYEEVSQKF
TSIRRVRGDNYAALRATLFQAMSQAVGLPPWLQDPELMLL
PEKLISKYNWIKQWKLGDLVDKIKESLTLLRKKWAGLAEM
RTAEARQIACDELFTNEAEEYSLYEAVKFLMLNRAIELYN
DKEKGKEVPFFSVLLFARDTSNDPGQLLRNHLNQVGHTGG
LEQVEMFLLAYAVRHTIQVYRLSKYNTEEFITVYPTDPPK
DWPVVTLIAEDDRHYNIPVRVCEETS
Description


Functional site

1) chain A
residue 271
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 1352
source : AC1

2) chain A
residue 274
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1352
source : AC1

3) chain A
residue 275
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 1352
source : AC1

4) chain A
residue 299
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1353
source : AC2

5) chain A
residue 97
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1354
source : AC3

6) chain A
residue 207
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 1354
source : AC3

7) chain A
residue 338
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1355
source : AC4

8) chain A
residue 281
type
sequence G
description BINDING SITE FOR RESIDUE SO4 A 1356
source : AC5

9) chain A
residue 282
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 1356
source : AC5

10) chain A
residue 264
type
sequence D
description BINDING SITE FOR RESIDUE SO4 B 1147
source : AC6

11) chain A
residue 265
type
sequence T
description BINDING SITE FOR RESIDUE SO4 B 1147
source : AC6

12) chain A
residue 126
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000269|PubMed:23708998, ECO:0000269|PubMed:23746843, ECO:0007744|PDB:3ZNZ, ECO:0007744|PDB:4KSL
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 339
type ACT_SITE
sequence H
description ACT_SITE => ECO:0000269|PubMed:23708998, ECO:0000269|PubMed:23746843, ECO:0007744|PDB:3ZNZ, ECO:0007744|PDB:4KSL
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 129
type ACT_SITE
sequence A
description Nucleophile => ECO:0000269|PubMed:23708998, ECO:0000269|PubMed:23746843, ECO:0000269|PubMed:24726327, ECO:0007744|PDB:3ZNZ, ECO:0007744|PDB:4KSL
source Swiss-Prot : SWS_FT_FI2

15) chain A
residue 314
type SITE
sequence E
description Linear diubiquitin binding => ECO:0000269|PubMed:23708998, ECO:0000269|PubMed:23746843, ECO:0007744|PDB:3ZNZ, ECO:0007744|PDB:4KSK, ECO:0007744|PDB:4KSL
source Swiss-Prot : SWS_FT_FI3


Display surface

Download
Links