eF-site ID 3ze3-A
PDB Code 3ze3
Chain A

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Title Crystal structure of the integral membrane diacylglycerol kinase - delta7
Classification TRANSFERASE
Compound DIACYLGLYCEROL KINASE
Source (KDGL_ECOLI)
Sequence A:  GFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLCVVIA
AWLDVDAVTRVLLISSVMLVMIVELLNSAIEAVVDRIGSE
YHELSGRAKDLGSAAVLIAIIDAVITWAILLWSHFG
Description


Functional site

1) chain A
residue 13
type
sequence A
description BINDING SITE FOR RESIDUE 78N B 1122
source : AC6

2) chain A
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE 78N B 1122
source : AC6

3) chain A
residue 17
type
sequence S
description BINDING SITE FOR RESIDUE 78N B 1122
source : AC6

4) chain A
residue 9
type
sequence R
description BINDING SITE FOR RESIDUE 78N B 1123
source : AC7

5) chain A
residue 33
type
sequence Q
description BINDING SITE FOR RESIDUE 78M D 1125
source : AC8

6) chain A
residue 34
type
sequence E
description BINDING SITE FOR RESIDUE 78M D 1125
source : AC8

7) chain A
residue 18
type
sequence W
description BINDING SITE FOR RESIDUE 78N A 1122
source : BC1

8) chain A
residue 22
type
sequence R
description BINDING SITE FOR RESIDUE 78N A 1122
source : BC1

9) chain A
residue 25
type
sequence W
description BINDING SITE FOR RESIDUE 78N A 1122
source : BC1

10) chain A
residue 26
type
sequence I
description BINDING SITE FOR RESIDUE 78N A 1122
source : BC1

11) chain A
residue 39
type
sequence L
description BINDING SITE FOR RESIDUE 78N A 1122
source : BC1

12) chain A
residue 63
type
sequence M
description BINDING SITE FOR RESIDUE 78N A 1122
source : BC1

13) chain A
residue 66
type
sequence M
description BINDING SITE FOR RESIDUE 78N A 1122
source : BC1

14) chain A
residue 30
type
sequence A
description BINDING SITE FOR RESIDUE 78M D 1126
source : BC2

15) chain A
residue 31
type
sequence F
description BINDING SITE FOR RESIDUE 78M D 1126
source : BC2

16) chain A
residue 34
type
sequence E
description BINDING SITE FOR RESIDUE 78M D 1126
source : BC2

17) chain A
residue 69
type
sequence E
description BINDING SITE FOR RESIDUE 78M D 1126
source : BC2

18) chain A
residue 102
type
sequence L
description BINDING SITE FOR RESIDUE 78M D 1126
source : BC2

19) chain A
residue 105
type
sequence I
description BINDING SITE FOR RESIDUE 78M D 1126
source : BC2

20) chain A
residue 40
type
sequence L
description BINDING SITE FOR RESIDUE 78N C 1123
source : BC4

21) chain A
residue 47
type
sequence W
description BINDING SITE FOR RESIDUE 78N C 1123
source : BC4

22) chain A
residue 117
type
sequence W
description BINDING SITE FOR RESIDUE 78M D 1128
source : BC5

23) chain A
residue 42
type
sequence V
description BINDING SITE FOR RESIDUE 78N A 1123
source : BC6

24) chain A
residue 46
type
sequence A
description BINDING SITE FOR RESIDUE 78N A 1123
source : BC6

25) chain A
residue 55
type
sequence R
description BINDING SITE FOR RESIDUE 78N A 1123
source : BC6

26) chain A
residue 50
type
sequence V
description BINDING SITE FOR RESIDUE 78N A 1124
source : BC7

27) chain A
residue 51
type
sequence D
description BINDING SITE FOR RESIDUE 78N A 1124
source : BC7

28) chain A
residue 52
type
sequence A
description BINDING SITE FOR RESIDUE 78N A 1124
source : BC7

29) chain A
residue 55
type
sequence R
description BINDING SITE FOR RESIDUE 78N A 1124
source : BC7

30) chain A
residue 110
type
sequence I
description BINDING SITE FOR RESIDUE 78M A 1125
source : BC8

31) chain A
residue 117
type
sequence W
description BINDING SITE FOR RESIDUE 78M A 1125
source : BC8

32) chain A
residue 41
type
sequence C
description BINDING SITE FOR RESIDUE 78M A 1126
source : BC9

33) chain A
residue 120
type
sequence F
description BINDING SITE FOR RESIDUE 78M A 1126
source : BC9

34) chain A
residue 13
type BINDING
sequence A
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129
source Swiss-Prot : SWS_FT_FI9

35) chain A
residue 16
type BINDING
sequence Y
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

36) chain A
residue 28
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

37) chain A
residue 76
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

38) chain A
residue 85
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

39) chain A
residue 94
type BINDING
sequence K
description BINDING => ECO:0000305|PubMed:26673816, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI10

40) chain A
residue 22
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26960129
source Swiss-Prot : SWS_FT_FI11

41) chain A
residue 30
type BINDING
sequence A
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129
source Swiss-Prot : SWS_FT_FI12

42) chain A
residue 47
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.25
source Swiss-Prot : SWS_FT_FI13

43) chain A
residue 55
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.25
source Swiss-Prot : SWS_FT_FI14

44) chain A
residue 31-47
type TRANSMEM
sequence FRQEGVAVLLCVVIAAW
description Helical => ECO:0000305|PubMed:12379131, ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI2

45) chain A
residue 51-68
type TRANSMEM
sequence DAVTRVLLISSVMLVMIV
description Helical => ECO:0000305|PubMed:12379131, ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI2

46) chain A
residue 48-50
type TOPO_DOM
sequence LDV
description Periplasmic => ECO:0000305|PubMed:12379131, ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI3

47) chain A
residue 69-94
type TOPO_DOM
sequence ELLNSAIEAVVDRIGSEYHELSGRAK
description Cytoplasmic => ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI4

48) chain A
residue 95-118
type TRANSMEM
sequence DLGSAAVLIAIIDAVITWAILLWS
description Helical => ECO:0000305|PubMed:8071224
source Swiss-Prot : SWS_FT_FI5

49) chain A
residue 119-121
type TOPO_DOM
sequence HFG
description Periplasmic => ECO:0000269|PubMed:15919996, ECO:0000269|PubMed:8071224
source Swiss-Prot : SWS_FT_FI6

50) chain A
residue 69
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000305|PubMed:26673816
source Swiss-Prot : SWS_FT_FI7

51) chain A
residue 69-80
type prosite
sequence ELLNSAIEAVVD
description DAGK_PROKAR Prokaryotic diacylglycerol kinase signature. ElLNSAIEavVD
source prosite : PS01069

52) chain A
residue 69
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI15

53) chain A
residue 98
type BINDING
sequence S
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129
source Swiss-Prot : SWS_FT_FI16

54) chain A
residue 112
type BINDING
sequence W
description BINDING => ECO:0000305|PubMed:23676677, ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:25055873, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538, ECO:0000305|PubMed:26960129, ECO:0000305|Ref.26
source Swiss-Prot : SWS_FT_FI17

55) chain A
residue 9
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:25012698, ECO:0000305|PubMed:26673816, ECO:0000305|PubMed:26894538
source Swiss-Prot : SWS_FT_FI8


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