eF-site ID 3x09-AB
PDB Code 3x09
Chain A, B

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Title Crystal structure of PIP4KIIBETA F205L complex with AMP
Classification TRANSFERASE
Compound Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
Source Homo sapiens (Human) (PI42B_HUMAN)
Sequence A:  VKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFK
AYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFGI
DDQDYQNSVTRSAPINRFLTTYDRRFVIKTVSSEDVAEMH
NILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVT
RNVLSHRLTVHRKYDLKGSTREASDKEKAKDLPTFKDNDF
LNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLV
GIHDVDRAEQEEMEVEERAEDGPGEFDPSVDVYAMKSHES
SPKKEVYFMAIIDILTVNPEQYSKRFNEFMSNILT
B:  KVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDF
KAYSKIKVDNHLFNKENLPSRFKFKEYCPMVFRNLRERFG
IDDQDYQNSVTRSAPINRFLTTYDRRFVIKTVSSEDVAEM
HNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVV
TRNVLSHRLTVHRKYDLKGVAREASDKEKAKDLPTFKDND
FLNEGQKHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLV
GIHDVDRAERFFGPGEFDPSVDVYAMKSHESSPKEVYFMA
IIDILTPNPEQYSKRFNEFMSNILT
Description


Functional site

1) chain A
residue 139
type
sequence F
description BINDING SITE FOR RESIDUE AMP A 501
source : AC1

2) chain A
residue 148
type
sequence V
description BINDING SITE FOR RESIDUE AMP A 501
source : AC1

3) chain A
residue 202
type
sequence R
description BINDING SITE FOR RESIDUE AMP A 501
source : AC1

4) chain A
residue 203
type
sequence N
description BINDING SITE FOR RESIDUE AMP A 501
source : AC1

5) chain A
residue 204
type
sequence V
description BINDING SITE FOR RESIDUE AMP A 501
source : AC1

6) chain A
residue 214
type
sequence K
description BINDING SITE FOR RESIDUE AMP A 501
source : AC1

7) chain A
residue 237
type
sequence T
description BINDING SITE FOR RESIDUE AMP A 501
source : AC1

8) chain A
residue 369
type
sequence D
description BINDING SITE FOR RESIDUE AMP A 501
source : AC1

9) chain A
residue 293
type
sequence Q
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

10) chain A
residue 297
type
sequence E
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

11) chain B
residue 96
type
sequence K
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

12) chain B
residue 98
type
sequence Y
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

13) chain B
residue 154
type
sequence S
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

14) chain B
residue 157
type
sequence V
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

15) chain B
residue 158
type
sequence A
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

16) chain B
residue 161
type
sequence H
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

17) chain B
residue 188
type
sequence R
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

18) chain B
residue 197
type
sequence Y
description BINDING SITE FOR RESIDUE AMP A 502
source : AC2

19) chain A
residue 96
type
sequence K
description BINDING SITE FOR RESIDUE AMP A 503
source : AC3

20) chain A
residue 98
type
sequence Y
description BINDING SITE FOR RESIDUE AMP A 503
source : AC3

21) chain A
residue 154
type
sequence S
description BINDING SITE FOR RESIDUE AMP A 503
source : AC3

22) chain A
residue 161
type
sequence H
description BINDING SITE FOR RESIDUE AMP A 503
source : AC3

23) chain A
residue 188
type
sequence R
description BINDING SITE FOR RESIDUE AMP A 503
source : AC3

24) chain A
residue 197
type
sequence Y
description BINDING SITE FOR RESIDUE AMP A 503
source : AC3

25) chain B
residue 139
type
sequence F
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

26) chain B
residue 148
type
sequence V
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

27) chain B
residue 150
type
sequence K
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

28) chain B
residue 201
type
sequence T
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

29) chain B
residue 202
type
sequence R
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

30) chain B
residue 203
type
sequence N
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

31) chain B
residue 204
type
sequence V
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

32) chain B
residue 214
type
sequence K
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

33) chain B
residue 282
type
sequence L
description BINDING SITE FOR RESIDUE AMP B 501
source : AC4

34) chain A
residue 150
type catalytic
sequence K
description 662
source MCSA : MCSA1

35) chain A
residue 278
type catalytic
sequence D
description 662
source MCSA : MCSA1

36) chain B
residue 150
type catalytic
sequence K
description 662
source MCSA : MCSA2

37) chain B
residue 278
type catalytic
sequence D
description 662
source MCSA : MCSA2

38) chain A
residue 202
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:26774281, ECO:0007744|PDB:3X03
source Swiss-Prot : SWS_FT_FI1

39) chain B
residue 202
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:26774281, ECO:0007744|PDB:3X03
source Swiss-Prot : SWS_FT_FI1

40) chain A
residue 203
type BINDING
sequence N
description BINDING => ECO:0000305|PubMed:26774281, ECO:0007744|PDB:3X04
source Swiss-Prot : SWS_FT_FI2

41) chain A
residue 214
type BINDING
sequence K
description BINDING => ECO:0000305|PubMed:26774281, ECO:0007744|PDB:3X04
source Swiss-Prot : SWS_FT_FI2

42) chain A
residue 369
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:26774281, ECO:0007744|PDB:3X04
source Swiss-Prot : SWS_FT_FI2

43) chain B
residue 203
type BINDING
sequence N
description BINDING => ECO:0000305|PubMed:26774281, ECO:0007744|PDB:3X04
source Swiss-Prot : SWS_FT_FI2

44) chain B
residue 214
type BINDING
sequence K
description BINDING => ECO:0000305|PubMed:26774281, ECO:0007744|PDB:3X04
source Swiss-Prot : SWS_FT_FI2

45) chain B
residue 369
type BINDING
sequence D
description BINDING => ECO:0000305|PubMed:26774281, ECO:0007744|PDB:3X04
source Swiss-Prot : SWS_FT_FI2

46) chain A
residue 94
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P48426
source Swiss-Prot : SWS_FT_FI3

47) chain B
residue 94
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P48426
source Swiss-Prot : SWS_FT_FI3

48) chain A
residue 150
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI4

49) chain B
residue 150
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI4


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