Title
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Crystal structure of P23-45 gp39 (6-132) bound to Thermus thermophilus RNA polymerase beta-flap domain |
Classification
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TRANSFERASE/TRANSCRIPTION |
Compound
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DNA-directed RNA polymerase subunit beta |
Source
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Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (A7XX65_9CAUD) |
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Sequence
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A: |
GPIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEE
GVVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGE
KARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVR
EVVRVYVAQ
|
B: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
|
C: |
GPIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEE
GVVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGE
KARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVR
EVVRVYVAQ
|
D: |
PVEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGD
LYTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARP
YAYAYAWQGDNGILHLYHAPVVL
|
E: |
IHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEGV
VRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEKA
RDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVREV
VRVYVAQ
|
F: |
PVEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGD
LYTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARP
YAYAYAWQGDNGILHLYHAPVVL
|
G: |
PIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEG
VVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEK
ARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVRE
VVRVYVAQK
|
H: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
|
I: |
PIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEG
VVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEK
ARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVRE
VVRVYVAQK
|
J: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
|
K: |
PIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEG
VVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEK
ARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVRE
VVRVYVAQ
|
L: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
|
M: |
IHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEGV
VRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEKA
RDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVREV
VRVYVAQK
|
N: |
PVEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGD
LYTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARP
YAYAYAWQGDNGILHLYHAPVVL
|
O: |
PIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEG
VVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEK
ARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVRE
VVRVYVAQK
|
P: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
|
Q: |
IHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEGV
VRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEKA
RDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVREV
VRVYVAQ
|
R: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
|
S: |
PIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEG
VVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEK
ARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVRE
VVRVYVAQK
|
T: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
|
U: |
RYEIEARDTKLGPERITRDIPHLSEAALRDLDEEGVVRIG
AEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEKARDVK
DTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVREVVRVY
V
|
V: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
|
W: |
PIHIERYEIEARDTKLGPERITRDIPHLSEAALRDLDEEG
VVRIGAEVKPGDILVGRTSFKGESEPTPEERLLRSIFGEK
ARDVKDTSLRVPPGEGGIVVRTVRLRRGDPGVELKPGVRE
VVRVYVAQK
|
X: |
VEPYIRLFEAIPDAETELATFYDADLDTLPPRMFLPSGDL
YTPPGPVRLEEIKRKRRVRLVKVSIYRFEHVGLGLAARPY
AYAYAWQGDNGILHLYHAPVVL
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Description
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