eF-site ID 3wj4-AB
PDB Code 3wj4
Chain A, B

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Title Crystal structure of PPARgamma ligand binding domain in complex with tributyltin
Classification TRANSCRIPTION
Compound Peroxisome proliferator-activated receptor gamma
Source Homo sapiens (Human) (PPARG_HUMAN)
Sequence A:  GSESADLRALAKHLYDSYIKSFPLTKAKARAILTGKKSPF
VIYDMNSLMMGEDKISKEVAIRIFQGCQFRSVEAVQEITE
YAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDG
VLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALE
LDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALE
LQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKK
TETDMSLHPLLQEIYK
B:  GPLGSESADLRALAKHLYDSYIKSFPLTKAKARAILTGKK
SPFVIYDMNSLMMGEDKIKFKHKEVAIRIFQGCQFRSVEA
VQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAV
KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDN
LLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL
LQVIKKTETDHPLLQEIYKD
Description


Functional site

1) chain A
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE TBY A 501
source : AC1

2) chain A
residue 289
type
sequence S
description BINDING SITE FOR RESIDUE TBY A 501
source : AC1

3) chain A
residue 327
type
sequence Y
description BINDING SITE FOR RESIDUE TBY A 501
source : AC1

4) chain A
residue 339
type
sequence V
description BINDING SITE FOR RESIDUE TBY A 501
source : AC1

5) chain A
residue 363
type
sequence F
description BINDING SITE FOR RESIDUE TBY A 501
source : AC1

6) chain A
residue 364
type
sequence M
description BINDING SITE FOR RESIDUE TBY A 501
source : AC1

7) chain A
residue 449
type
sequence H
description BINDING SITE FOR RESIDUE TBY A 501
source : AC1

8) chain B
residue 284
type
sequence G
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

9) chain B
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

10) chain B
residue 288
type
sequence R
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

11) chain B
residue 327
type
sequence Y
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

12) chain B
residue 330
type
sequence L
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

13) chain B
residue 339
type
sequence V
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

14) chain B
residue 353
type
sequence L
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

15) chain B
residue 363
type
sequence F
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

16) chain B
residue 364
type
sequence M
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

17) chain B
residue 449
type
sequence H
description BINDING SITE FOR RESIDUE TBY B 501
source : AC2

18) chain A
residue 286
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 323
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

20) chain A
residue 449
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

21) chain A
residue 473
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

22) chain B
residue 286
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

23) chain B
residue 323
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

24) chain B
residue 449
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

25) chain B
residue 473
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

26) chain A
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2

27) chain B
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


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