eF-site ID 3vht-C
PDB Code 3vht
Chain C

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Title Crystal structure of GFP-Wrnip1 UBZ domain fusion protein in complex with ubiquitin
Classification FLUORESCENT PROTEIN/PROTEIN BINDING
Compound Green fluorescent protein
Source ORGANISM_COMMON: Mouse; ORGANISM_SCIENTIFIC: Mus musculus;
Sequence C:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Description


Functional site

1) chain C
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

2) chain C
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

3) chain C
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

4) chain C
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

5) chain C
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

6) chain C
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

7) chain C
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI5

8) chain C
residue 76
type MOD_RES
sequence G
description ADP-ribosylglycine => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI4

9) chain C
residue 76
type CROSSLNK
sequence G
description Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
source Swiss-Prot : SWS_FT_FI6

10) chain C
residue 72
type MOD_RES
sequence R
description (Z)-2,3-didehydrotyrosine => ECO:0000269|PubMed:8448132
source Swiss-Prot : SWS_FT_FI1

11) chain C
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62979
source Swiss-Prot : SWS_FT_FI3

12) chain C
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299


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