eF-site ID 3v0b-A
PDB Code 3v0b
Chain A

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Title 3.9 angstrom crystal structure of BoNT/Ai in complex with NTNHA
Classification TOXIN
Compound BoNT/A
Source Clostridium botulinum (Q45914_CLOBO)
Sequence A:  MPFVNKQFNYKDPVNGVDIAYIKIPNAGQMQPVKAFKIHN
KIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLST
DNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGG
STIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADI
IQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESL
EVDTNPLLGAGKFATDPAVTLAHQLIHAGHRLYGIAINPN
RVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQEN
EFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEK
YLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKV
LNAKTFLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAAN
FNGQNTEINNMNFTKLKNFTGLFEFYKLLCVRGILNDLCI
KVNNWDLFFSPSEDNFTNDLNKGEEITSDTNIEAAEENIS
LDLIQQYYLTFNFDNEPENISIENLSSDIIGQLELMPNIE
RFPNGKKYELDKYTMFHYLRAQEFEHGKSRIALTNSVNEA
LLNPSRVYTFFSSDYVKKVNKATEAAMFLGWVEQLVYDFT
DETSEVSTTDKIADITIIIPYIGPALNIGNMLYKDDFVGA
LIFSGAVILLEFIPEIAIPVLGTFALVSYIANKVLTVQTI
DNALSKRNEKWDEVYKYIVTNWLAKVNTQIDLIRKKMKEA
LENQAEATKAIINYQYNQYTEEEKNNINFNIDDLSSKLNE
SINKAMININKFLNQCSVSYLMNSMIPYGVKRLEDFDASL
KDALLKYIYDNRGTLIGQVDRLKDKVNNTLSTDIPFQLSK
YVDNQRLLSTFTEYIKNIINTSILNLRYESNHLIDLSRYA
SKINIGSKVNFDPIDKNQIQLFNLESSKIEVILKNAIVYN
SMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWK
VSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWI
FVTITNNRLNNSKIYINGRLIDQKPISNLGNIHASNNIMF
KLDGCRDTHRYIWIKYFNLFDKELNEKEIKDLYDNQSNSG
ILKDFWGDYLQYDKPYYMLNLYDPNKYVDVNNVGIRGYMY
LKGPRGSVMTTNIYLNSSLYRGAKFIIKKYASGNKDNIVR
NNDRVYINVVVKNKEYRLATNASQAGVEKILSALEIPDVG
NLSQVVVMKSKNDQGITNKCKMNLQDNNGNDIGFIGFHQF
NNIAKLVASNWYNRQIERSSRTLGCSWEFIPVDDGWGERP
Description (1)  BoNT/A, NTNH


Functional site

1) chain A
residue 223
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1297
source : AC1

2) chain A
residue 227
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1297
source : AC1

3) chain A
residue 262
type
sequence E
description BINDING SITE FOR RESIDUE ZN A 1297
source : AC1

4) chain A
residue 575
type
sequence A
description BINDING SITE FOR RESIDUE CA A 1298
source : AC2

5) chain A
residue 578
type
sequence N
description BINDING SITE FOR RESIDUE CA A 1298
source : AC2

6) chain A
residue 581
type
sequence R
description BINDING SITE FOR RESIDUE CA A 1298
source : AC2

7) chain A
residue 223
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU10095, ECO:0000269|PubMed:17173035, ECO:0000305|PubMed:9783750, ECO:0007744|PDB:2NYY, ECO:0007744|PDB:2NZ9, ECO:0007744|PDB:3BTA, ECO:0007744|PDB:3QIX, ECO:0007744|PDB:3QIY, ECO:0007744|PDB:3QIZ, ECO:0007744|PDB:3QJ0
source Swiss-Prot : SWS_FT_FI3

8) chain A
residue 227
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU10095, ECO:0000269|PubMed:17173035, ECO:0000305|PubMed:9783750, ECO:0007744|PDB:2NYY, ECO:0007744|PDB:2NZ9, ECO:0007744|PDB:3BTA, ECO:0007744|PDB:3QIX, ECO:0007744|PDB:3QIY, ECO:0007744|PDB:3QIZ, ECO:0007744|PDB:3QJ0
source Swiss-Prot : SWS_FT_FI3

9) chain A
residue 224
type ACT_SITE
sequence Q
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10095
source Swiss-Prot : SWS_FT_FI2

10) chain A
residue 627-647
type TRANSMEM
sequence IADITIIIPYIGPALNIGNML
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

11) chain A
residue 656-676
type TRANSMEM
sequence LIFSGAVILLEFIPEIAIPVL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI1

12) chain A
residue 262
type BINDING
sequence E
description BINDING => ECO:0000255|PROSITE-ProRule:PRU10095, ECO:0000269|PubMed:17173035, ECO:0007744|PDB:2NYY, ECO:0007744|PDB:2NZ9, ECO:0007744|PDB:3BTA, ECO:0007744|PDB:3QIX, ECO:0007744|PDB:3QIY, ECO:0007744|PDB:3QIZ, ECO:0007744|PDB:3QJ0
source Swiss-Prot : SWS_FT_FI4


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