eF-site ID 3ur4-B
PDB Code 3ur4
Chain B

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Title Crystal structure of human WD repeat domain 5 with compound
Classification TRANSCRIPTION/INHIBITOR
Compound WD repeat-containing protein 5
Source null (WDR5_HUMAN)
Sequence B:  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIK
IWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKT
LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD
ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS
YDGLCRIWDTASGQCLKTLINPPVSFVKFSPNGKYILAAT
LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW
IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE
NIIASAALENDKTIKLWKSDC
Description


Functional site

1) chain B
residue 117
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 3002
source : AC9

2) chain B
residue 49
type
sequence S
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

3) chain B
residue 50
type
sequence S
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

4) chain B
residue 65
type
sequence A
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

5) chain B
residue 89
type
sequence G
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

6) chain B
residue 90
type
sequence I
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

7) chain B
residue 91
type
sequence S
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

8) chain B
residue 92
type
sequence D
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

9) chain B
residue 133
type
sequence F
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

10) chain B
residue 175
type
sequence S
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

11) chain B
residue 191
type
sequence Y
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

12) chain B
residue 261
type
sequence C
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

13) chain B
residue 305
type
sequence I
description BINDING SITE FOR RESIDUE 0BW B 1000
source : BC1

14) chain B
residue 98
type
sequence D
description BINDING SITE FOR RESIDUE EDO B 2001
source : BC2

15) chain B
residue 100
type
sequence N
description BINDING SITE FOR RESIDUE EDO B 2001
source : BC2

16) chain B
residue 101
type
sequence L
description BINDING SITE FOR RESIDUE EDO B 2001
source : BC2

17) chain B
residue 228
type
sequence Y
description BINDING SITE FOR RESIDUE EDO B 2002
source : BC3

18) chain B
residue 250
type
sequence K
description BINDING SITE FOR RESIDUE EDO B 2002
source : BC3

19) chain B
residue 289
type
sequence Q
description BINDING SITE FOR RESIDUE EDO B 2002
source : BC3

20) chain B
residue 272
type
sequence K
description BINDING SITE FOR RESIDUE EDO B 2008
source : BC4

21) chain B
residue 191
type
sequence Y
description BINDING SITE FOR RESIDUE EDO B 2009
source : BC5

22) chain B
residue 234
type
sequence L
description BINDING SITE FOR RESIDUE EDO B 2009
source : BC5

23) chain B
residue 259
type
sequence K
description BINDING SITE FOR RESIDUE EDO B 2009
source : BC5

24) chain B
residue 165
type
sequence K
description BINDING SITE FOR RESIDUE EDO B 2010
source : BC6

25) chain B
residue 200
type
sequence T
description BINDING SITE FOR RESIDUE EDO B 2010
source : BC6

26) chain B
residue 201
type
sequence A
description BINDING SITE FOR RESIDUE EDO B 2010
source : BC6

27) chain B
residue 191
type
sequence Y
description BINDING SITE FOR RESIDUE EDO B 2014
source : BC7

28) chain B
residue 97
type
sequence S
description BINDING SITE FOR RESIDUE CL B 335
source : BC8

29) chain B
residue 98
type
sequence D
description BINDING SITE FOR RESIDUE CL B 335
source : BC8

30) chain B
residue 141
type
sequence S
description BINDING SITE FOR RESIDUE CL B 335
source : BC8

31) chain B
residue 52
type
sequence K
description BINDING SITE FOR RESIDUE CL B 1004
source : BC9

32) chain B
residue 92
type
sequence D
description BINDING SITE FOR RESIDUE CL B 1004
source : BC9

33) chain B
residue 135
type
sequence C
description BINDING SITE FOR RESIDUE CL B 1004
source : BC9

34) chain B
residue 136
type
sequence N
description BINDING SITE FOR RESIDUE CL B 1004
source : BC9

35) chain B
residue 52
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 3001
source : CC1

36) chain B
residue 178
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 3001
source : CC1

37) chain B
residue 221
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 3001
source : CC1

38) chain B
residue 263
type
sequence F
description BINDING SITE FOR RESIDUE SO4 B 3001
source : CC1

39) chain B
residue 112
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI2

40) chain B
residue 46
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI3

41) chain B
residue 107
type SITE
sequence D
description Important for interaction with histone H3
source Swiss-Prot : SWS_FT_FI1

42) chain B
residue 133
type SITE
sequence F
description Important for interaction with histone H3
source Swiss-Prot : SWS_FT_FI1

43) chain B
residue 263
type SITE
sequence F
description Important for interaction with histone H3
source Swiss-Prot : SWS_FT_FI1

44) chain B
residue 322
type SITE
sequence E
description Important for interaction with histone H3
source Swiss-Prot : SWS_FT_FI1


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