eF-site ID 3u9q-AB
PDB Code 3u9q
Chain A, B

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Title Ligand binding domain of PPARgamma complexed with Decanoic Acid and PGC-1a peptide
Classification TRANSCRIPTION
Compound Peroxisome proliferator-activated receptor gamma
Source Homo sapiens (Human) (PRGC1_HUMAN)
Sequence A:  SADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPF
VIYDMNSLMMGEDKIKEVAIRIFQGCQFRSVEAVQEITEY
AKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGV
LISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALEL
DDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALEL
QLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKT
ETDMSLHPLLQEIYKDL
B:  SLLKKLLLA
Description


Functional site

1) chain A
residue 278
type
sequence A
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

2) chain A
residue 282
type
sequence F
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

3) chain A
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

4) chain A
residue 289
type
sequence S
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

5) chain A
residue 323
type
sequence H
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

6) chain A
residue 360
type
sequence F
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

7) chain A
residue 363
type
sequence F
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

8) chain A
residue 449
type
sequence H
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

9) chain A
residue 469
type
sequence L
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

10) chain A
residue 473
type
sequence Y
description BINDING SITE FOR RESIDUE DKA A 1
source : AC1

11) chain B
residue 146
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:O70343
source Swiss-Prot : SWS_FT_FI1

12) chain A
residue 323
type MOD_RES
sequence H
description N6-acetyllysine => ECO:0000250|UniProtKB:O70343
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 449
type MOD_RES
sequence H
description N6-acetyllysine => ECO:0000250|UniProtKB:O70343
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 473
type MOD_RES
sequence Y
description N6-acetyllysine => ECO:0000250|UniProtKB:O70343
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


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