eF-site ID 3u4s-A
PDB Code 3u4s
Chain A

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Title Histone Lysine demethylase JMJD2A in complex with T11C peptide substrate crosslinked to N-oxalyl-D-cysteine
Classification OXIDOREDUCTASE/OXIDOREDUCTASE SUBSTRATE
Compound Lysine-specific demethylase 4A
Source Homo sapiens (Human) (H31_HUMAN)
Sequence A:  LNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKV
VPPKEWKPRASYDDIDDLVIPAPIQQLVTGQSGLFTQYNI
QKKAMTVREFRKIANSDKYCTPRYSEFEELERKYWKNLTF
NPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGIT
IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS
WYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISP
LMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAE
STNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPE
RYKLWKAGKDNTVIDHTLPTPEAAE
Description


Functional site

1) chain A
residue 188
type
sequence H
description BINDING SITE FOR RESIDUE NI A 501
source : AC1

2) chain A
residue 190
type
sequence E
description BINDING SITE FOR RESIDUE NI A 501
source : AC1

3) chain A
residue 276
type
sequence H
description BINDING SITE FOR RESIDUE NI A 501
source : AC1

4) chain A
residue 234
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

5) chain A
residue 240
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

6) chain A
residue 306
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

7) chain A
residue 308
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

8) chain A
residue 132
type
sequence Y
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

9) chain A
residue 177
type
sequence Y
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

10) chain A
residue 185
type
sequence F
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

11) chain A
residue 188
type
sequence H
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

12) chain A
residue 190
type
sequence E
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

13) chain A
residue 196
type
sequence S
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

14) chain A
residue 198
type
sequence N
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

15) chain A
residue 206
type
sequence K
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

16) chain A
residue 208
type
sequence W
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

17) chain A
residue 276
type
sequence H
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

18) chain A
residue 288
type
sequence S
description BINDING SITE FOR RESIDUE 08P A 503
source : AC3

19) chain A
residue 170
type catalytic
sequence G
description 370
source MCSA : MCSA1

20) chain A
residue 177
type catalytic
sequence Y
description 370
source MCSA : MCSA1

21) chain A
residue 188
type catalytic
sequence H
description 370
source MCSA : MCSA1

22) chain A
residue 190
type catalytic
sequence E
description 370
source MCSA : MCSA1

23) chain A
residue 276
type catalytic
sequence H
description 370
source MCSA : MCSA1

24) chain A
residue 288
type catalytic
sequence S
description 370
source MCSA : MCSA1

25) chain A
residue 206
type MOD_RES
sequence K
description Symmetric dimethylarginine; by PRMT5; alternate => ECO:0000250|UniProtKB:P68433
source Swiss-Prot : SWS_FT_FI1

26) chain A
residue 306
type MOD_RES
sequence C
description Phosphothreonine; by PKC and CHEK1 => ECO:0000269|PubMed:12560483, ECO:0000269|PubMed:18066052, ECO:0000269|PubMed:18243098, ECO:0000269|PubMed:22901803
source Swiss-Prot : SWS_FT_FI4

27) chain A
residue 308
type MOD_RES
sequence C
description Phosphothreonine; by PKC and CHEK1 => ECO:0000269|PubMed:12560483, ECO:0000269|PubMed:18066052, ECO:0000269|PubMed:18243098, ECO:0000269|PubMed:22901803
source Swiss-Prot : SWS_FT_FI4


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