eF-site ID 3ty0-B
PDB Code 3ty0
Chain B

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Title Structure of PPARgamma ligand binding domain in complex with (R)-5-(3-((3-(6-methoxybenzo[d]isoxazol-3-yl)-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-1-yl)methyl)phenyl)-5-methyloxazolidine-2,4-dione
Classification TRANSCRIPTION REGULATOR
Compound Peroxisome proliferator-activated receptor gamma
Source Homo sapiens (Human) (PPARG_HUMAN)
Sequence B:  GSQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIR
IFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKY
GVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGL
LNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMT
DLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
Description


Functional site

1) chain B
residue 764
type
sequence F
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

2) chain B
residue 766
type
sequence H
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

3) chain B
residue 784
type
sequence G
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

4) chain B
residue 785
type
sequence C
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

5) chain B
residue 788
type
sequence R
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

6) chain B
residue 789
type
sequence S
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

7) chain B
residue 792
type
sequence A
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

8) chain B
residue 826
type
sequence I
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

9) chain B
residue 829
type
sequence M
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

10) chain B
residue 830
type
sequence L
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

11) chain B
residue 833
type
sequence L
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

12) chain B
residue 841
type
sequence I
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

13) chain B
residue 842
type
sequence S
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

14) chain B
residue 864
type
sequence M
description BINDING SITE FOR RESIDUE 082 B 2
source : AC2

15) chain B
residue 786
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

16) chain B
residue 823
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

17) chain B
residue 949
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

18) chain B
residue 973
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

19) chain B
residue 724
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


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