eF-site ID 3tf6-A
PDB Code 3tf6
Chain A

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Title Crystal structure of Neutrophil gelatinase-associated lipocalin (C87S mutant) in complex with Europium and the siderophore analog tren(cam)(1,2-hopo)2
Classification ANTIMICROBIAL PROTEIN
Compound Neutrophil gelatinase-associated lipocalin
Source (NGAL_HUMAN)
Sequence A:  STSDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAIL
REDKDPQKMYATIYELKEDKSYNVTSVLFRKKKCDYWIRT
FVPGSQPGEFTLGNIKSYPGLTSYLVRVVSTNYNQHAMVF
FKKVSQNREYFKITLYGRTKELTSELKENFIRFSKSLGLP
ENHIVFPVPIDQCIDG
Description (1)  Neutrophil gelatinase-associated lipocalin


Functional site

1) chain A
residue 42
type
sequence L
description BINDING SITE FOR RESIDUE GOL A 201
source : AC1

2) chain A
residue 164
type
sequence N
description BINDING SITE FOR RESIDUE GOL A 201
source : AC1

3) chain A
residue 165
type
sequence H
description BINDING SITE FOR RESIDUE GOL A 201
source : AC1

4) chain A
residue 106
type
sequence Y
description BINDING SITE FOR RESIDUE DBH A 216
source : AC3

5) chain A
residue 123
type
sequence F
description BINDING SITE FOR RESIDUE DBH A 216
source : AC3

6) chain A
residue 125
type
sequence K
description BINDING SITE FOR RESIDUE DBH A 216
source : AC3

7) chain A
residue 132
type
sequence Y
description BINDING SITE FOR RESIDUE DBH A 216
source : AC3

8) chain A
residue 134
type
sequence K
description BINDING SITE FOR RESIDUE DBH A 216
source : AC3

9) chain A
residue 52
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 A 221
source : AC4

10) chain A
residue 54
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 221
source : AC4

11) chain A
residue 68
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 221
source : AC4

12) chain A
residue 81
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 221
source : AC4

13) chain A
residue 123
type
sequence F
description BINDING SITE FOR RESIDUE SO4 A 221
source : AC4

14) chain A
residue 134
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 221
source : AC4

15) chain A
residue 136
type
sequence T
description BINDING SITE FOR RESIDUE SO4 A 221
source : AC4

16) chain A
residue 138
type
sequence Y
description BINDING SITE FOR RESIDUE SO4 A 221
source : AC4

17) chain A
residue 75
type
sequence K
description BINDING SITE FOR RESIDUE GOL C 201
source : AC8

18) chain A
residue 117
type
sequence Q
description BINDING SITE FOR RESIDUE GOL C 184
source : BC4

19) chain A
residue 146
type
sequence S
description BINDING SITE FOR RESIDUE CL A 183
source : BC6

20) chain A
residue 21-34
type prosite
sequence NFQDNQFQGKWYVV
description LIPOCALIN Lipocalin signature. NFQdnQFQGKWYVV
source prosite : PS00213

21) chain A
residue 52
type BINDING
sequence Y
description BINDING => ECO:0007744|PDB:1X89, ECO:0007744|PDB:1X8U
source Swiss-Prot : SWS_FT_FI1

22) chain A
residue 106
type BINDING
sequence Y
description BINDING => ECO:0007744|PDB:3CMP
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 134
type BINDING
sequence K
description BINDING => ECO:0007744|PDB:3CMP
source Swiss-Prot : SWS_FT_FI2

24) chain A
residue 125
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:15642259, ECO:0007744|PDB:1X89, ECO:0007744|PDB:1X8U
source Swiss-Prot : SWS_FT_FI3

25) chain A
residue 138
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:15642259, ECO:0007744|PDB:1X89, ECO:0007744|PDB:1X8U
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 65
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:10684642, ECO:0000269|PubMed:15084671, ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:16740002, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:7683678, ECO:0007744|PDB:1DFV, ECO:0007744|PDB:1QQS
source Swiss-Prot : SWS_FT_FI5


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