eF-site ID 3swc-A
PDB Code 3swc
Chain A

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Title GLP (G9a-like protein) SET domain in complex with Dnmt3aK44me2 peptide
Classification TRANSFERASE
Compound Histone-lysine N-methyltransferase EHMT1
Source Homo sapiens (Human) (DNM3A_MOUSE)
Sequence A:  VERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQNC
VTSPMNIDRNITHLQYCVCIDDCSSSNCMCGQLSMRCWYD
KDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLR
ARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEA
DVREEDSYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEP
NLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGER
FWDIKGKLFSCRCGSPKCRHS
Description


Functional site

1) chain A
residue 1031
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 301
source : AC1

2) chain A
residue 1044
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 301
source : AC1

3) chain A
residue 1074
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 301
source : AC1

4) chain A
residue 1078
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 301
source : AC1

5) chain A
residue 1037
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 302
source : AC2

6) chain A
residue 1074
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 302
source : AC2

7) chain A
residue 1080
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 302
source : AC2

8) chain A
residue 1084
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 302
source : AC2

9) chain A
residue 1031
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 303
source : AC3

10) chain A
residue 1033
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 303
source : AC3

11) chain A
residue 1037
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 303
source : AC3

12) chain A
residue 1042
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 303
source : AC3

13) chain A
residue 1172
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 304
source : AC4

14) chain A
residue 1225
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 304
source : AC4

15) chain A
residue 1227
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 304
source : AC4

16) chain A
residue 1232
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 304
source : AC4

17) chain A
residue 1105
type
sequence M
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

18) chain A
residue 1107
type
sequence W
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

19) chain A
residue 1141
type
sequence S
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

20) chain A
residue 1142
type
sequence Y
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

21) chain A
residue 1166
type
sequence R
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

22) chain A
residue 1169
type
sequence N
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

23) chain A
residue 1170
type
sequence H
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

24) chain A
residue 1211
type
sequence Y
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

25) chain A
residue 1223
type
sequence F
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

26) chain A
residue 1224
type
sequence S
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

27) chain A
residue 1225
type
sequence C
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

28) chain A
residue 1226
type
sequence R
description BINDING SITE FOR RESIDUE SAH A 202
source : AC5

29) chain A
residue 1031
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

30) chain A
residue 1105
type BINDING
sequence M
description
source Swiss-Prot : SWS_FT_FI1

31) chain A
residue 1142
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI1

32) chain A
residue 1169
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

33) chain A
residue 1172
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

34) chain A
residue 1225
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

35) chain A
residue 1226
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI1

36) chain A
residue 1227
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

37) chain A
residue 1232
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

38) chain A
residue 1033
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 1037
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

40) chain A
residue 1042
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 1044
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

42) chain A
residue 1074
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

43) chain A
residue 1078
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

44) chain A
residue 1080
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

45) chain A
residue 1084
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

46) chain A
residue 1124
type SITE
sequence Y
description Histone H3K9me binding => ECO:0000269|PubMed:18264113, ECO:0000269|PubMed:20084102
source Swiss-Prot : SWS_FT_FI2

47) chain A
residue 1017
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3


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