eF-site ID 3s8g-ABC PDB Code 3s8g Chain A, B, C click to enlarge Title 1.8 A structure of ba3 cytochrome c oxidase mutant (A120F) from Thermus thermophilus in lipid environment Classification OXIDOREDUCTASE Compound Cytochrome c oxidase subunit 1 Source null (COXA_THET8) Sequence A:  SRVYEAYPEKKATLYFLVLGFLALIVGSLFGPFQALNYGN VDAYPLLKRLLPFVQSYYQGLTLHGVLNAIVFTQLFAQAI MVYLPARELNMRPNMGLMWLSWWMAFIGLVVFALPLLANE ATVLYTFYPPLKGHWAFYLGASVFVLSTWVSIYIVLDLWR RWKAANPGKVTPLVTYMAVVFWLMWFLASLGLVLEAVLFL LPWSFGLVEGVDPLVARTLFWWTGHPIVYFWLLPAYAIIY TILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADP GIDPTWKMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRG GRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNAS FTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNL TGKPISDAQRRLGLAVVWLWFLGMMIMAVGLHWAGLLNVP RRAYIAQVPDAYPHAAVPMVFNVLAGIVLLVALLLFIYGL FSVLLSRERKPELAEAPLPFAEVISGPEDRRLVLAMDRIG FWFAVAAILVVLAYGPTLVQLFGHLNPVPGWRLW B:  DEHKAHKAILAYEKGWLAFSLAMLFVFIALIAYTLATHTA GVIPAGKLERVDPTTVRQEGPWADPAQAVVQTGPNQYTVY VLAFAFGYQPNPIEVPQGAEIVFKITSPDVIHGFHVEGTN INVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFG TIVVKE C:  KPKGALAVILVLTLTILVFWLGVYAVFFARG Description Functional site 1) chain A residue 39 type sequence G description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 2) chain A residue 40 type sequence P description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 3) chain A residue 42 type sequence Q description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 4) chain A residue 43 type sequence A description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 5) chain A residue 46 type sequence Y description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 6) chain A residue 65 type sequence Y description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 7) chain A residue 69 type sequence L description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 8) chain A residue 72 type sequence H description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 9) chain A residue 76 type sequence N description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 10) chain A residue 77 type sequence A description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 11) chain A residue 132 type sequence L description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 12) chain A residue 133 type sequence Y description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 13) chain A residue 385 type sequence F description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 14) chain A residue 386 type sequence H description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 15) chain A residue 390 type sequence A description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 16) chain A residue 394 type sequence T description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 17) chain A residue 432 type sequence M description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 18) chain A residue 435 type sequence M description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 19) chain A residue 449 type sequence R description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 20) chain A residue 450 type sequence R description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 21) chain A residue 451 type sequence A description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 22) chain A residue 477 type sequence L description BINDING SITE FOR RESIDUE HEM A 800 source : AC1 23) chain A residue 133 type sequence Y description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 24) chain A residue 229 type sequence W description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 25) chain A residue 236 type sequence V description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 26) chain A residue 237 type sequence Y description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 27) chain A residue 282 type sequence H description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 28) chain A residue 283 type sequence H description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 29) chain A residue 309 type sequence S description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 30) chain A residue 310 type sequence L description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 31) chain A residue 313 type sequence A description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 32) chain A residue 353 type sequence L description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 33) chain A residue 356 type sequence F description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 34) chain A residue 360 type sequence G description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 35) chain A residue 363 type sequence G description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 36) chain A residue 366 type sequence N description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 37) chain A residue 367 type sequence A description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 38) chain A residue 372 type sequence D description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 39) chain A residue 376 type sequence H description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 40) chain A residue 384 type sequence H description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 41) chain A residue 385 type sequence F description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 42) chain A residue 388 type sequence Q description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 43) chain A residue 449 type sequence R description BINDING SITE FOR RESIDUE HAS A 801 source : AC2 44) chain A residue 233 type sequence H description BINDING SITE FOR RESIDUE CU A 803 source : AC3 45) chain A residue 282 type sequence H description BINDING SITE FOR RESIDUE CU A 803 source : AC3 46) chain A residue 283 type sequence H description BINDING SITE FOR RESIDUE CU A 803 source : AC3 47) chain A residue 233 type sequence H description BINDING SITE FOR RESIDUE PER A 563 source : AC4 48) chain A residue 236 type sequence V description BINDING SITE FOR RESIDUE PER A 563 source : AC4 49) chain A residue 283 type sequence H description BINDING SITE FOR RESIDUE PER A 563 source : AC4 50) chain A residue 358 type sequence P description BINDING SITE FOR RESIDUE OLC A 564 source : AC5 51) chain A residue 433 type sequence M description BINDING SITE FOR RESIDUE OLC A 564 source : AC5 52) chain A residue 440 type sequence H description BINDING SITE FOR RESIDUE OLC A 564 source : AC5 53) chain C residue 22 type sequence F description BINDING SITE FOR RESIDUE OLC A 564 source : AC5 54) chain C residue 32 type sequence A description BINDING SITE FOR RESIDUE OLC A 564 source : AC5 55) chain A residue 161 type sequence Y description BINDING SITE FOR RESIDUE OLC A 566 source : AC7 56) chain A residue 213 type sequence F description BINDING SITE FOR RESIDUE OLC A 567 source : AC8 57) chain A residue 215 type sequence L description BINDING SITE FOR RESIDUE OLC A 567 source : AC8 58) chain A residue 341 type sequence W description BINDING SITE FOR RESIDUE OLC A 567 source : AC8 59) chain A residue 426 type sequence W description BINDING SITE FOR RESIDUE OLC A 567 source : AC8 60) chain A residue 304 type sequence F description BINDING SITE FOR RESIDUE OLC A 568 source : AC9 61) chain A residue 517 type sequence D description BINDING SITE FOR RESIDUE OLC A 568 source : AC9 62) chain B residue 16 type sequence K description BINDING SITE FOR RESIDUE OLC A 568 source : AC9 63) chain B residue 37 type sequence L description BINDING SITE FOR RESIDUE OLC A 568 source : AC9 64) chain B residue 38 type sequence A description BINDING SITE FOR RESIDUE OLC A 568 source : AC9 65) chain A residue 212 type sequence S description BINDING SITE FOR RESIDUE OLC A 569 source : BC1 66) chain A residue 213 type sequence F description BINDING SITE FOR RESIDUE OLC A 569 source : BC1 67) chain A residue 214 type sequence G description BINDING SITE FOR RESIDUE OLC A 569 source : BC1 68) chain A residue 111 type sequence W description BINDING SITE FOR RESIDUE OLC A 570 source : BC2 69) chain A residue 161 type sequence Y description BINDING SITE FOR RESIDUE OLC A 571 source : BC3 70) chain A residue 164 type sequence L description BINDING SITE FOR RESIDUE OLC A 571 source : BC3 71) chain A residue 165 type sequence D description BINDING SITE FOR RESIDUE OLC A 571 source : BC3 72) chain A residue 168 type sequence R description BINDING SITE FOR RESIDUE OLC A 571 source : BC3 73) chain A residue 167 type sequence W description BINDING SITE FOR RESIDUE OLC A 572 source : BC4 74) chain A residue 168 type sequence R description BINDING SITE FOR RESIDUE OLC A 572 source : BC4 75) chain A residue 528 type sequence G description BINDING SITE FOR RESIDUE OLC A 572 source : BC4 76) chain A residue 104 type sequence G description BINDING SITE FOR RESIDUE OLC A 573 source : BC5 77) chain A residue 108 type sequence L description BINDING SITE FOR RESIDUE OLC A 573 source : BC5 78) chain A residue 464 type sequence A description BINDING SITE FOR RESIDUE OLC A 573 source : BC5 79) chain A residue 468 type sequence V description BINDING SITE FOR RESIDUE OLC A 573 source : BC5 80) chain A residue 102 type sequence N description BINDING SITE FOR RESIDUE OLC A 574 source : BC6 81) chain A residue 104 type sequence G description BINDING SITE FOR RESIDUE OLC A 574 source : BC6 82) chain A residue 105 type sequence L description BINDING SITE FOR RESIDUE OLC A 574 source : BC6 83) chain A residue 112 type sequence M description BINDING SITE FOR RESIDUE OLC A 574 source : BC6 84) chain A residue 472 type sequence L description BINDING SITE FOR RESIDUE OLC A 574 source : BC6 85) chain A residue 416 type sequence A description BINDING SITE FOR RESIDUE OLC A 575 source : BC7 86) chain A residue 19 type sequence K description BINDING SITE FOR RESIDUE OLC A 576 source : BC8 87) chain A residue 23 type sequence Y description BINDING SITE FOR RESIDUE OLC A 576 source : BC8 88) chain A residue 107 type sequence W description BINDING SITE FOR RESIDUE OLC A 576 source : BC8 89) chain A residue 111 type sequence W description BINDING SITE FOR RESIDUE OLC A 576 source : BC8 90) chain A residue 337 type sequence R description BINDING SITE FOR RESIDUE OLC A 577 source : BC9 91) chain A residue 341 type sequence W description BINDING SITE FOR RESIDUE OLC A 577 source : BC9 92) chain A residue 441 type sequence W description BINDING SITE FOR RESIDUE OLC A 578 source : CC1 93) chain B residue 114 type sequence H description BINDING SITE FOR RESIDUE CUA B 802 source : CC2 94) chain B residue 149 type sequence C description BINDING SITE FOR RESIDUE CUA B 802 source : CC2 95) chain B residue 151 type sequence Q description BINDING SITE FOR RESIDUE CUA B 802 source : CC2 96) chain B residue 153 type sequence C description BINDING SITE FOR RESIDUE CUA B 802 source : CC2 97) chain B residue 157 type sequence H description BINDING SITE FOR RESIDUE CUA B 802 source : CC2 98) chain B residue 160 type sequence M description BINDING SITE FOR RESIDUE CUA B 802 source : CC2 99) chain B residue 21 type sequence F description BINDING SITE FOR RESIDUE OLC B 169 source : CC3 100) chain B residue 32 type sequence L description BINDING SITE FOR RESIDUE OLC B 169 source : CC3 101) chain B residue 35 type sequence Y description BINDING SITE FOR RESIDUE OLC B 169 source : CC3 102) chain C residue 27 type sequence Y description BINDING SITE FOR RESIDUE OLC B 169 source : CC3 103) chain C residue 31 type sequence F description BINDING SITE FOR RESIDUE OLC B 169 source : CC3 104) chain A residue 441 type sequence W description BINDING SITE FOR RESIDUE OLC B 170 source : CC4 105) chain B residue 141 type sequence R description BINDING SITE FOR RESIDUE OLC B 170 source : CC4 106) chain B residue 144 type sequence E description BINDING SITE FOR RESIDUE OLC B 170 source : CC4 107) chain B residue 145 type sequence Y description BINDING SITE FOR RESIDUE OLC B 170 source : CC4 108) chain C residue 33 type sequence R description BINDING SITE FOR RESIDUE OLC B 170 source : CC4 109) chain B residue 13 type sequence A description BINDING SITE FOR RESIDUE OLC B 171 source : CC5 110) chain B residue 14 type sequence Y description BINDING SITE FOR RESIDUE OLC B 171 source : CC5 111) chain B residue 17 type sequence G description BINDING SITE FOR RESIDUE OLC B 171 source : CC5 112) chain B residue 18 type sequence W description BINDING SITE FOR RESIDUE OLC B 171 source : CC5 113) chain B residue 21 type sequence F description BINDING SITE FOR RESIDUE OLC B 171 source : CC5 114) chain B residue 35 type sequence Y description BINDING SITE FOR RESIDUE OLC B 171 source : CC5 115) chain C residue 12 type sequence I description BINDING SITE FOR RESIDUE OLC B 171 source : CC5 116) chain C residue 17 type sequence L description BINDING SITE FOR RESIDUE OLC B 171 source : CC5 117) chain B residue 42 type sequence A description BINDING SITE FOR RESIDUE OLC B 172 source : CC6 118) chain C residue 28 type sequence A description BINDING SITE FOR RESIDUE OLC C 35 source : CC7 119) chain A residue 384 type MOD_RES sequence H description N-formylmethionine => ECO:0000269|PubMed:11152118 source Swiss-Prot : SWS_FT_FI2 120) chain A residue 386 type MOD_RES sequence H description N-formylmethionine => ECO:0000269|PubMed:11152118 source Swiss-Prot : SWS_FT_FI2 121) chain A residue 233 type CROSSLNK sequence H description 1'-histidyl-3'-tyrosine (His-Tyr) source Swiss-Prot : SWS_FT_FI5 122) chain A residue 237 type CROSSLNK sequence Y description 1'-histidyl-3'-tyrosine (His-Tyr) source Swiss-Prot : SWS_FT_FI5 123) chain B residue 112-160 type prosite sequence VIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQ YCGLGHQNM description COX2 CO II and nitrous oxide reductase dinuclear copper centers signature. ViHgfhvegtninvevlpgevstvrytfkrpgeyrii......CnqyCglgHqnM source prosite : PS00078 124) chain A residue 229-283 type prosite sequence WWTGHPIVYFWLLPAYAIIYTILPKQAGGKLVSDPMARLA FLLFLLLSTPVGFHH description COX1_CUB Heme-copper oxidase catalytic subunit, copper B binding region signature. WWTGHPiVyfwllpayaiiytilpkqaggklvsdpmarlafllflllstpvgf..HH source prosite : PS00077 125) chain B residue 86 type catalytic sequence F description 735 source MCSA : MCSA1 126) chain B residue 88 type catalytic sequence F description 735 source MCSA : MCSA1 127) chain A residue 384 type catalytic sequence H description 735 source MCSA : MCSA1 128) chain A residue 385 type catalytic sequence F description 735 source MCSA : MCSA1 129) chain A residue 386 type catalytic sequence H description 735 source MCSA : MCSA1 130) chain A residue 449 type catalytic sequence R description 735 source MCSA : MCSA1 131) chain A residue 450 type catalytic sequence R description 735 source MCSA : MCSA1 132) chain C residue 4-34 type TRANSMEM sequence KPKGALAVILVLTLTILVFWLGVYAVFFARG description Helical source Swiss-Prot : SWS_FT_FI1 133) chain A residue 74-94 type TRANSMEM sequence VLNAIVFTQLFAQAIMVYLPA description Helical source Swiss-Prot : SWS_FT_FI1 134) chain A residue 105-125 type TRANSMEM sequence LMWLSWWMAFIGLVVFALPLL description Helical source Swiss-Prot : SWS_FT_FI1 135) chain A residue 144-164 type TRANSMEM sequence AFYLGASVFVLSTWVSIYIVL description Helical source Swiss-Prot : SWS_FT_FI1 136) chain A residue 187-207 type TRANSMEM sequence VVFWLMWFLASLGLVLEAVLF description Helical source Swiss-Prot : SWS_FT_FI1 137) chain A residue 227-247 type TRANSMEM sequence LFWWTGHPIVYFWLLPAYAII description Helical source Swiss-Prot : SWS_FT_FI1 138) chain A residue 267-287 type TRANSMEM sequence LAFLLFLLLSTPVGFHHQFAD description Helical source Swiss-Prot : SWS_FT_FI1 139) chain A residue 300-320 type TRANSMEM sequence VLTLFVAVPSLMTAFTVAASL description Helical source Swiss-Prot : SWS_FT_FI1 140) chain A residue 345-365 type TRANSMEM sequence AFVAPVLGLLGFIPGGAGGIV description Helical source Swiss-Prot : SWS_FT_FI1 141) chain A residue 385-405 type TRANSMEM sequence FHLQVASLVTLTAMGSLYWLL description Helical source Swiss-Prot : SWS_FT_FI1 142) chain A residue 420-440 type TRANSMEM sequence LGLAVVWLWFLGMMIMAVGLH description Helical source Swiss-Prot : SWS_FT_FI1 143) chain A residue 471-491 type TRANSMEM sequence VLAGIVLLVALLLFIYGLFSV description Helical source Swiss-Prot : SWS_FT_FI1 144) chain A residue 527-547 type TRANSMEM sequence IGFWFAVAAILVVLAYGPTLV description Helical source Swiss-Prot : SWS_FT_FI1 145) chain B residue 39-168 type TOPO_DOM sequence THTAGVIPAGKLERVDPTTVRQEGPWADPAQAVVQTGPNQ YTVYVLAFAFGYQPNPIEVPQGAEIVFKITSPDVIHGFHV EGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQ NMFGTIVVKE description Periplasmic source Swiss-Prot : SWS_FT_FI3 146) chain A residue 237 type TOPO_DOM sequence Y description Periplasmic source Swiss-Prot : SWS_FT_FI3 147) chain B residue 153 type BINDING sequence C description source Swiss-Prot : SWS_FT_FI4 148) chain B residue 157 type BINDING sequence H description source Swiss-Prot : SWS_FT_FI4 149) chain B residue 114 type BINDING sequence H description source Swiss-Prot : SWS_FT_FI4 150) chain B residue 149 type BINDING sequence C description source Swiss-Prot : SWS_FT_FI4

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