eF-site ID 3rv0-ABCD
PDB Code 3rv0
Chain A, B, C, D

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Title Crystal structure of K. polysporus Dcr1 without the C-terminal dsRBD
Classification RNA BINDING PROTEIN
Compound K. polysporus Dcr1
Source Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) (Kluyveromyces polysporus) (A7TR32_VANPO)
Sequence A:  SNELKVREFYRLHNACVKLKESIKLIYENPLVTDQNVLNL
GTAENTIDYTILNTPTLNVAKTLLGNRYSLDLIDLFQSHD
FKDSNTDVDMFIKYPVVYDENLENLAFMHKSFPAHLNDAQ
KTQLSNERLEFLGDSWLGALVSYIVYTRFPSANEGMLSQM
KESIVNNNNLFDWSTKLNFTKRLQGNIATPKDKMSKRYAD
CVEAYIGALVIDRFGTEFLDIKEWLEELSEKKLAKSSQM
B:  SNELKVREFYRLHNACVKLKESIKLIYENPLVTDQNVLNL
GTAENTIDYTILNTPTLNVAKTLLGNRYSLDLIDLFQSHD
FKDSNTDVDMFIKYPVVYDENLENLAFMHKDAQKTQLSNE
RLEFLGDSWLGALVSYIVYTRFPSANEGMLSQMKESIVNN
NNLFDWSTKLNFTKRLQGNIADKMSKRYADCVEAYIGALV
IDRFGTEFLDIKEWLEELSEKKLAKPLNKNAKNELAELLQ
INKLGHKLHYRKLTEMPPFRVEVKIGDILLDEAEGNSIRE
AEHRAAMKVLENDELLRKYSVYDL
C:  SNELKVREFYRLHNACVKLKESIKLIYENPLVTDQNVLNL
GTAENTIDYTILNTPTLNVAKTLLGNRYSLDLIDLFQSHD
FKDSNTDVDMFIKYPVVYDENLENLAFMHKTQLSNERLEF
LGDSWLGALVSYIVYTRFPSANEGMLSQMKESIVNNNNLF
DWSTKLNFTKRLQGNIATPTRVVKDKMSKRYADCVEAYIG
ALVIDRFGTEFLDIKEWLEELSEKKLAK
D:  SNELKVREFYRLHNACVKLKESIKLIYENPLVTDQNVLNL
GTAENTIDYTILNTPTLNVAKTLLGNRYSLDLIDLFQSHD
FKDSNTDVDMFIKYPVVYDENLENLAFMHKSFTQLSNERL
EFLGDSWLGALVSYIVYTRFPSANEGMLSQMKESIVNNNN
LFDWSTKLNFTKRLQGNIATPTRVVKDKMSKRYADCVEAY
IGALVIDRFGTEFLDIKEWLEELSEKKLAKSS
Description


Functional site

1) chain A
residue 147
type
sequence E
description BINDING SITE FOR RESIDUE MG A 1
source : AC1

2) chain A
residue 217
type
sequence K
description BINDING SITE FOR RESIDUE MG A 1
source : AC1

3) chain A
residue 221
type
sequence D
description BINDING SITE FOR RESIDUE MG A 1
source : AC1

4) chain A
residue 224
type
sequence E
description BINDING SITE FOR RESIDUE MG A 1
source : AC1

5) chain B
residue 147
type
sequence E
description BINDING SITE FOR RESIDUE MG B 3
source : AC2

6) chain B
residue 221
type
sequence D
description BINDING SITE FOR RESIDUE MG B 3
source : AC2

7) chain B
residue 224
type
sequence E
description BINDING SITE FOR RESIDUE MG B 3
source : AC2

8) chain C
residue 147
type
sequence E
description BINDING SITE FOR RESIDUE MG C 4
source : AC3

9) chain C
residue 221
type
sequence D
description BINDING SITE FOR RESIDUE MG C 4
source : AC3

10) chain C
residue 224
type
sequence E
description BINDING SITE FOR RESIDUE MG C 4
source : AC3

11) chain D
residue 147
type
sequence E
description BINDING SITE FOR RESIDUE MG D 2
source : AC4

12) chain D
residue 221
type
sequence D
description BINDING SITE FOR RESIDUE MG D 2
source : AC4

13) chain D
residue 224
type
sequence E
description BINDING SITE FOR RESIDUE MG D 2
source : AC4

14) chain A
residue 144-152
type prosite
sequence ERLEFLGDS
description RNASE_3_1 Ribonuclease III family signature. ERLEFLGDS
source prosite : PS00517


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