eF-site ID 3r8f-D
PDB Code 3r8f
Chain D

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Title Replication initiator DnaA bound to AMPPCP and single-stranded DNA
Classification REPLICATION ACTIVATOR/DNA
Compound Chromosomal replication initiator protein dnaA
Source Aquifex aeolicus (strain VF5) (3R8F)
Sequence D:  DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIF
IYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAMV
EHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFF
HIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGIL
VEIELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTKNV
REIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYY
AVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARA
FKRKDHTTVIHAIRSVEEEKRKFKHLVGFLEKQAFDKIC
Description


Functional site

1) chain D
residue 230
type
sequence R
description BINDING SITE FOR RESIDUE ACP A 700
source : AC2

2) chain D
residue 126
type
sequence T
description BINDING SITE FOR RESIDUE MG D 401
source : AC7

3) chain D
residue 180
type
sequence D
description BINDING SITE FOR RESIDUE MG D 401
source : AC7

4) chain D
residue 181
type
sequence D
description BINDING SITE FOR RESIDUE MG D 401
source : AC7

5) chain D
residue 83
type
sequence Y
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

6) chain D
residue 87
type
sequence N
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

7) chain D
residue 88
type
sequence F
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

8) chain D
residue 89
type
sequence I
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

9) chain D
residue 94
type
sequence N
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

10) chain D
residue 121
type
sequence V
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

11) chain D
residue 122
type
sequence G
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

12) chain D
residue 123
type
sequence T
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

13) chain D
residue 124
type
sequence G
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

14) chain D
residue 125
type
sequence K
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

15) chain D
residue 126
type
sequence T
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

16) chain D
residue 127
type
sequence H
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

17) chain D
residue 253
type
sequence K
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

18) chain D
residue 276
type
sequence V
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

19) chain D
residue 277
type
sequence R
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

20) chain D
residue 280
type
sequence E
description BINDING SITE FOR RESIDUE ACP D 700
source : AC8

21) chain D
residue 119
type BINDING
sequence G
description BINDING => ECO:0000255
source Swiss-Prot : SWS_FT_FI1


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