eF-site ID 3qys-A
PDB Code 3qys
Chain A

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Title Room Temperature X-ray Structure of D-Xylose Isomerase in complex with 0.6Ni2+ cation bound in M2 metal binding site at pH=5.8
Classification ISOMERASE
Compound Xylose isomerase
Source ORGANISM_SCIENTIFIC: Streptomyces rubiginosus;
Sequence A:  MNYQPTPEDRFTFGLWTVGWQGRDPFGDATRRALDPVESV
RRLAELGAHGVTFHDDDLIPFGSSDSEREEHVKRFRQALD
DTGMKVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTI
RNIDLAVELGAETYVAWGGREGAESGGAKDVRDALDRMKE
AFDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHAL
AFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGK
LFHIDLNGQNGIKYDQDLRFGAGDLRAAFWLVDLLESAGY
SGPRHFDFKPPRTEDFDGVWASAAGCMRNYLILKERAAAF
RADPEVQEALRASRLDELARPTAADGLQALLDDRSAFEEF
DVDAAAARGMAFERLDQLAMDHLLGARG
Description


Functional site

1) chain A
residue 217
type
sequence E
description BINDING SITE FOR RESIDUE NI A 401
source : AC1

2) chain A
residue 220
type
sequence H
description BINDING SITE FOR RESIDUE NI A 401
source : AC1

3) chain A
residue 255
type
sequence D
description BINDING SITE FOR RESIDUE NI A 401
source : AC1

4) chain A
residue 257
type
sequence D
description BINDING SITE FOR RESIDUE NI A 401
source : AC1

5) chain A
residue 54
type ACT_SITE
sequence H
description
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 57
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

7) chain A
residue 245
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI3

8) chain A
residue 255
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI3

9) chain A
residue 257
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI3

10) chain A
residue 287
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI3

11) chain A
residue 181
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 217
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI3

13) chain A
residue 220
type BINDING
sequence H
description
source Swiss-Prot : SWS_FT_FI3


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