eF-site ID 3q23-B PDB Code 3q23 Chain B click to enlarge Title X-ray crystal structure of the N4 mini-VRNAP and P2_7a promoter transcription initiation complex with GMPCPP and Manganese: sustrate complex II Classification TRANSFERASE/DNA Compound Virion RNA polymerase Source (3Q23) Sequence B:  TEELKEGIDAVYPSLVGTADSKAEGIKNYFKLSFTLPEEQ KSRTVGSEAPLKDVAQALSSRARYELFTEKETANPAFNGE VIKRYKELMEHGEGIADILRSRLAKFLNTKDVGKRFAQGT EANRWVGGKLLNIVEQDGDTFKYNEQLLQTAVLAGLQWRL TATSNTAIKDAKDVAAITGIDQALLPEGLVEQFDTGMTLT EAVSSLAQKIESYWGLSRNPNAPLGYTKGIPTAMAAEILA AFVESTDVVENIVDMSEIDPDNKKTIGLYTITELDSFDPI NSFPTAIEEAVLVNPTEKMFFGDDIPPVANTQLRNPAVRN TPEQKAALKAEQATEFYVHTPMVQFYETLGKDRILELMGA GTLNKELLNDNHAKSLEGKNRSVEDSYNQLFSVIEQVRAQ SEDISTVPIHYAYNMTRVGRMQMLGKYNPQSAKLVREAIL PTKATLDLSNQNNEDFSAFQLGLAQALDIKVHTMTREVMS DELTKLLEGNLKPAIDMMVEFNTTGSLPENAVDVLNTALG DRKSFVALMALMEYSRYLVAEDKSAFVTPLYVEADGVTNG PINAMMLMTGGLFTPDWIRNIAKGGLFIGSPNKTMNEHRS TADNNDLYQASTNALMESLGKLRSNYASNMPIQSQIDSLL SLMDLFLPDINLGENGALELKRGIAKNPLTITIYGSGARG IAGKLVSSVTDAIYERMSDVLKARAKDPNISAAMAMFGKQ AASEAHAEELLARFLKDMETLTSTVPVKRKGVLELQSTGT GAKGKINPKTYTIKGEQLKALQENMLHFFVEPLRNGITQT VGESLVYSTEQLQKATQIQSVVLEDMFKQRVQEKLAEKAK DPTWKKGDFLTQKELNDIQASLNNLAPMIETGSQTFYIAG SENAEVANQVLATNLDDRMRVPMSIYAPAQAGVAGIPFMT IGTGDGMMMQTLSTMKGAPKNTLKIFDGMNIGLNDITDAS RKANEAVYTSWQGNPIKNVYESYAKFMKNVDFSKLSPEAL EAIGKSALEYDQRENATVDDIANAASLIERNLRNIALGVD IRHKVLDKVNLSIDQMAAVGAPYQNNGKIDLSNMTPEQQA DELNKLFREELEAR Description Functional site 1) chain B residue 424 type sequence R description BINDING SITE FOR RESIDUE G2P B 1108 source : AC6 2) chain B residue 437 type sequence K description BINDING SITE FOR RESIDUE G2P B 1108 source : AC6 3) chain B residue 557 type sequence E description BINDING SITE FOR RESIDUE G2P B 1108 source : AC6 4) chain B residue 559 type sequence D description BINDING SITE FOR RESIDUE G2P B 1108 source : AC6 5) chain B residue 925 type sequence I description BINDING SITE FOR RESIDUE G2P B 1108 source : AC6 6) chain B residue 950 type sequence F description BINDING SITE FOR RESIDUE G2P B 1108 source : AC6 7) chain B residue 951 type sequence D description BINDING SITE FOR RESIDUE G2P B 1108 source : AC6 8) chain B residue 424 type sequence R description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 9) chain B residue 559 type sequence D description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 10) chain B residue 560 type sequence G description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 11) chain B residue 561 type sequence V description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 12) chain B residue 562 type sequence T description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 13) chain B residue 563 type sequence N description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 14) chain B residue 564 type sequence G description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 15) chain B residue 565 type sequence P description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 16) chain B residue 612 type sequence Y description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 17) chain B residue 666 type sequence R description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 18) chain B residue 670 type sequence K description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 19) chain B residue 671 type sequence N description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 20) chain B residue 678 type sequence Y description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 21) chain B residue 951 type sequence D description BINDING SITE FOR RESIDUE G2P B 1109 source : AC7 22) chain B residue 559 type sequence D description BINDING SITE FOR RESIDUE MN B 1107 source : AC8 23) chain B residue 951 type sequence D description BINDING SITE FOR RESIDUE MN B 1107 source : AC8 24) chain B residue 559 type sequence D description BINDING SITE FOR RESIDUE MN B 1110 source : AC9 25) chain B residue 560 type sequence G description BINDING SITE FOR RESIDUE MN B 1110 source : AC9 26) chain B residue 951 type sequence D description BINDING SITE FOR RESIDUE MN B 1110 source : AC9 27) chain B residue 469 type sequence Q description BINDING SITE FOR RESIDUE 2HP B 1111 source : BC1 28) chain B residue 473 type sequence I description BINDING SITE FOR RESIDUE 2HP B 1111 source : BC1 29) chain B residue 474 type sequence K description BINDING SITE FOR RESIDUE 2HP B 1111 source : BC1 30) chain B residue 475 type sequence V description BINDING SITE FOR RESIDUE 2HP B 1111 source : BC1 31) chain B residue 476 type sequence H description BINDING SITE FOR RESIDUE 2HP B 1111 source : BC1 32) chain B residue 437 type BINDING sequence K description BINDING => ECO:0000269|PubMed:21321236, ECO:0000269|PubMed:23235152 source Swiss-Prot : SWS_FT_FI1 33) chain B residue 559 type BINDING sequence D description BINDING => ECO:0000269|PubMed:21321236, ECO:0000269|PubMed:23235152 source Swiss-Prot : SWS_FT_FI1 34) chain B residue 670 type BINDING sequence K description BINDING => ECO:0000269|PubMed:21321236, ECO:0000269|PubMed:23235152 source Swiss-Prot : SWS_FT_FI1 35) chain B residue 951 type BINDING sequence D description BINDING => ECO:0000269|PubMed:21321236, ECO:0000269|PubMed:23235152 source Swiss-Prot : SWS_FT_FI1

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