eF-site ID 3phd-B
PDB Code 3phd
Chain B

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Title Crystal structure of human HDAC6 in complex with ubiquitin
Classification PROTEIN BINDING
Compound Histone deacetylase 6
Source null (UBB_HUMAN)
Sequence B:  PLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSC
YQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQA
YVHHQALLDVKNIAHQNKFG
Description


Functional site

1) chain B
residue 37
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2000
source : AC4

2) chain B
residue 40
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2000
source : AC4

3) chain B
residue 56
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 2000
source : AC4

4) chain B
residue 62
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 2000
source : AC4

5) chain B
residue 25
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2001
source : AC5

6) chain B
residue 28
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2001
source : AC5

7) chain B
residue 45
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2001
source : AC5

8) chain B
residue 52
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 2001
source : AC5

9) chain B
residue 5
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2002
source : AC6

10) chain B
residue 7
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 2002
source : AC6

11) chain B
residue 75
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2002
source : AC6

12) chain B
residue 78
type
sequence C
description BINDING SITE FOR RESIDUE ZN B 2002
source : AC6

13) chain B
residue 5
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

14) chain B
residue 7
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

15) chain B
residue 25
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

16) chain B
residue 28
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

17) chain B
residue 37
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

18) chain B
residue 40
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

19) chain B
residue 45
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

20) chain B
residue 52
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

21) chain B
residue 56
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

22) chain B
residue 62
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

23) chain B
residue 75
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

24) chain B
residue 78
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2


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