eF-site ID 3pd5-B
PDB Code 3pd5
Chain B

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Title Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi in complex with an analog of threonyl-adenylate
Classification LIGASE
Compound Threonyl-tRNA synthetase
Source Pyrococcus abyssi (strain GE5 / Orsay) (SYT_PYRAB)
Sequence B:  MRVLLIHSDYIEYEVKDKALKNPEPISEDMKRGRMEEVLV
AFISVEKVDEKNPEEVSLKAIEEISKVAEQVKAENVFVYP
FAHLSSELAKPSVAMDILNRVYQGLKERGFNVGKAPFGYY
KAFKISCKGHPLAELSRTIVPEEARVE
Description


Functional site

1) chain B
residue 128
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 500
source : AC1

2) chain B
residue 19
type
sequence A
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

3) chain B
residue 20
type
sequence L
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

4) chain B
residue 43
type
sequence I
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

5) chain B
residue 45
type
sequence V
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

6) chain B
residue 81
type
sequence F
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

7) chain B
residue 82
type
sequence A
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

8) chain B
residue 88
type
sequence L
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

9) chain B
residue 89
type
sequence A
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

10) chain B
residue 117
type
sequence F
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

11) chain B
residue 118
type
sequence G
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3

12) chain B
residue 120
type
sequence Y
description BINDING SITE FOR RESIDUE TSB B 502
source : AC3


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