eF-site ID 3pd5-A
PDB Code 3pd5
Chain A

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Title Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi in complex with an analog of threonyl-adenylate
Classification LIGASE
Compound Threonyl-tRNA synthetase
Source Pyrococcus abyssi (strain GE5 / Orsay) (SYT_PYRAB)
Sequence A:  MRVLLIHSDYIEYEVKDKALKNPEPISEDMKRGRMEEVLV
AFISVEKVDEKNPEEVSLKAIEEISKVAEQVKAENVFVYP
FAHLSSELAKPSVAMDILNRVYQGLKERGFNVGKAPFGYY
KAFKISCKGHPLAELSRTIVPE
Description


Functional site

1) chain A
residue 16
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 500
source : AC1

2) chain A
residue 19
type
sequence A
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

3) chain A
residue 20
type
sequence L
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

4) chain A
residue 43
type
sequence I
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

5) chain A
residue 45
type
sequence V
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

6) chain A
residue 81
type
sequence F
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

7) chain A
residue 82
type
sequence A
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

8) chain A
residue 88
type
sequence L
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

9) chain A
residue 89
type
sequence A
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

10) chain A
residue 94
type
sequence A
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

11) chain A
residue 117
type
sequence F
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

12) chain A
residue 118
type
sequence G
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2

13) chain A
residue 120
type
sequence Y
description BINDING SITE FOR RESIDUE TSB A 501
source : AC2


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