eF-site ID 3pcf-M
PDB Code 3pcf
Chain M

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Title STRUCTURE OF PROTOCATECHUATE 3,4-DIOXYGENASE COMPLEXED WITH 3-FLURO-4-HYDROXYBENZOATE
Classification DIOXYGENASE
Compound PROTOCATECHUATE 3,4-DIOXYGENASE
Source ORGANISM_SCIENTIFIC: Pseudomonas putida;
Sequence M:  PAQDNSRFVIRDRNWHPKALTPDYKTSIARSPRQALVSIP
QSISETTGPNFSHLGFGAHDHDLLLNFGLPIGERIIVAGR
VVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNF
GGVGRCLTDSDGYYSFRTIKPGPYPWRNGPNDWRPAHIHF
GISGPSIATKLITQLYFEGDPLIPMCPIVKSIANPEAVQQ
LIAKLDMNNANPMDCLAYRFDIVLRGQRKTHFE
Description


Functional site

1) chain M
residue 324
type
sequence Y
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

2) chain M
residue 326
type
sequence T
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

3) chain M
residue 400
type
sequence W
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

4) chain M
residue 408
type
sequence Y
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

5) chain M
residue 447
type
sequence Y
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

6) chain M
residue 448
type
sequence P
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

7) chain M
residue 449
type
sequence W
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

8) chain M
residue 450
type
sequence R
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

9) chain M
residue 457
type
sequence R
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

10) chain M
residue 460
type
sequence H
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

11) chain M
residue 462
type
sequence H
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

12) chain M
residue 477
type
sequence Q
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

13) chain M
residue 491
type
sequence I
description SITE "ACA" IS THE ACTIVE SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : ACA

14) chain M
residue 304
type
sequence D
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

15) chain M
residue 307
type
sequence R
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

16) chain M
residue 339
type
sequence I
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

17) chain M
residue 340
type
sequence P
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

18) chain M
residue 341
type
sequence Q
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

19) chain M
residue 342
type
sequence S
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

20) chain M
residue 343
type
sequence I
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

21) chain M
residue 344
type
sequence S
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

22) chain M
residue 345
type
sequence E
description SITE "VEA" IS THE VESTIGIAL SITE OF THE PROTOMER CONSISTING OF CHAINS A AND M.
source : VEA

23) chain M
residue 318
type
sequence K
description SECONDARY THREE-FOLD SITE BETWEEN M, N, O CHAINS.
source : S2M

24) chain M
residue 320
type
sequence L
description SECONDARY THREE-FOLD SITE BETWEEN M, N, O CHAINS.
source : S2M

25) chain M
residue 322
type
sequence P
description SECONDARY THREE-FOLD SITE BETWEEN M, N, O CHAINS.
source : S2M

26) chain M
residue 328
type
sequence I
description SECONDARY THREE-FOLD SITE BETWEEN M, N, O CHAINS.
source : S2M

27) chain M
residue 332
type
sequence P
description SECONDARY THREE-FOLD SITE BETWEEN M, N, O CHAINS.
source : S2M

28) chain M
residue 333
type
sequence R
description SECONDARY THREE-FOLD SITE BETWEEN M, N, O CHAINS.
source : S2M

29) chain M
residue 334
type
sequence Q
description SECONDARY THREE-FOLD SITE BETWEEN M, N, O CHAINS.
source : S2M

30) chain M
residue 408
type
sequence Y
description BINDING SITE FOR RESIDUE FE M 600
source : AC1

31) chain M
residue 447
type
sequence Y
description BINDING SITE FOR RESIDUE FE M 600
source : AC1

32) chain M
residue 460
type
sequence H
description BINDING SITE FOR RESIDUE FE M 600
source : AC1

33) chain M
residue 462
type
sequence H
description BINDING SITE FOR RESIDUE FE M 600
source : AC1

34) chain M
residue 361
type
sequence H
description BINDING SITE FOR RESIDUE BME M 601
source : AC7

35) chain M
residue 429
type
sequence C
description BINDING SITE FOR RESIDUE BME M 601
source : AC7

36) chain M
residue 430
type
sequence L
description BINDING SITE FOR RESIDUE BME M 601
source : AC7

37) chain M
residue 438
type
sequence S
description BINDING SITE FOR RESIDUE BME M 601
source : AC7

38) chain M
residue 324
type
sequence Y
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

39) chain M
residue 408
type
sequence Y
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

40) chain M
residue 447
type
sequence Y
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

41) chain M
residue 449
type
sequence W
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

42) chain M
residue 457
type
sequence R
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

43) chain M
residue 460
type
sequence H
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

44) chain M
residue 462
type
sequence H
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

45) chain M
residue 477
type
sequence Q
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

46) chain M
residue 491
type
sequence I
description BINDING SITE FOR RESIDUE FHB M 550
source : AC8

47) chain M
residue 333
type
sequence R
description BINDING SITE FOR RESIDUE FHB M 551
source : AC9

48) chain M
residue 322
type
sequence P
description BINDING SITE FOR RESIDUE FHB N 551
source : BC3

49) chain M
residue 328
type
sequence I
description BINDING SITE FOR RESIDUE FHB N 551
source : BC3

50) chain M
residue 448
type BINDING
sequence P
description BINDING => ECO:0000269|PubMed:7990141
source Swiss-Prot : SWS_FT_FI1

51) chain M
residue 461
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:7990141
source Swiss-Prot : SWS_FT_FI1

52) chain M
residue 463
type BINDING
sequence F
description BINDING => ECO:0000269|PubMed:7990141
source Swiss-Prot : SWS_FT_FI1

53) chain M
residue 409
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:7990141
source Swiss-Prot : SWS_FT_FI1

54) chain M
residue 409
type catalytic
sequence R
description 936
source MCSA : MCSA1

55) chain M
residue 448
type catalytic
sequence P
description 936
source MCSA : MCSA1

56) chain M
residue 458
type catalytic
sequence P
description 936
source MCSA : MCSA1

57) chain M
residue 461
type catalytic
sequence I
description 936
source MCSA : MCSA1

58) chain M
residue 463
type catalytic
sequence F
description 936
source MCSA : MCSA1

59) chain M
residue 380-408
type prosite
sequence VAGRVVDQYGKPVPNTLVEMWQANAGGRY
description INTRADIOL_DIOXYGENAS Intradiol ring-cleavage dioxygenases signature. VaGrVvdqyGkpVpntlVEMwqanagGrY
source prosite : PS00083


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