eF-site ID 3p83-ABCDEF PDB Code 3p83 Chain A, B, C, D, E, F click to enlarge Title Structure of the PCNA:RNase HII complex from Archaeoglobus fulgidus. Classification HYDROLASE/DNA BINDING PROTEIN Compound DNA polymerase sliding clamp Source Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (RNH2_ARCFU) Sequence A:  MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVD PANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKS ISTKDLVELIVEDESTLKVKFGSVEYKVALIDPSAIRKEP RIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEG FRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKE FCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAP RIES B:  MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVD PANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKS ISTKDLVELIVEDESTLKVKFGSVEYKVALIDPSAIRKEP RIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEG FRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKE FCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAP RIES C:  MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVD PANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKS ISTKDLVELIVEDESTLKVKFGSVEYKVALIDPSAIRKEP RIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEG FRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKE FCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAP RIE D:  SPEFPGRLMKAGIDEAGKGCVIGPLVVAGVACSDEDRLRK LGVKDSKKLSQGRREELAEEIRKICRTEVLKVSPENLDER MAAKTINEILKECYAEIILRLKPEIAYVDSPDVIPERLSR ELEEITGLRVVAEHKADEKYPLVAAASIIAKVEREREIER LKEKFGDFGSGYASDPRTREVLKEWIASGRIPSCVRMRWK TVSNLRQKTLDDF E:  LMKAGIDEAGKGCVIGPLVVAGVACSDEDRLRKLGVKDSK KLSQGRREELAEEIRKICRTEVLKVSPENLDERMAAKTIN EILKECYAEIILRLKPEIAYVDSPDVIPERLSRELEEITG LRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGD FGSGYASDPRTREVLKEWIASGRIPSCVRMRWKLRQKTLD DF F:  MKAGIDEAGKGCVIGPLVVAGVACSDEDRLRKLGVKDSKK LSQGRREELAEEIRKICRTEVLKVSPENLDERMAAKTINE ILKECYAEIILRLKPEIAYVDSPDVIPERLSRELEEITGL RVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGDF GSGYASDPRTREVLKEWIASGRIPSCVRMRWKTVSNLRQK TLDDF Description Functional site 1) chain A residue 33-56 type prosite sequence GLHSRAVDPANVAMVIVDIPKDSF description PCNA_1 Proliferating cell nuclear antigen signature 1. GLhSrAVDpANVaMViVdIpkdsF source prosite : PS01251 2) chain D residue 6 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 3) chain D residue 7 type BINDING sequence E description source Swiss-Prot : SWS_FT_FI1 4) chain D residue 101 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 5) chain E residue 6 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 6) chain E residue 7 type BINDING sequence E description source Swiss-Prot : SWS_FT_FI1 7) chain E residue 101 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 8) chain F residue 6 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 9) chain F residue 7 type BINDING sequence E description source Swiss-Prot : SWS_FT_FI1 10) chain F residue 101 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 11) chain D residue 46 type BINDING sequence R description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 12) chain F residue 143 type BINDING sequence K description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 13) chain F residue 146 type BINDING sequence R description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 14) chain F residue 164 type BINDING sequence Y description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 15) chain D residue 143 type BINDING sequence K description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 16) chain D residue 146 type BINDING sequence R description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 17) chain D residue 164 type BINDING sequence Y description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 18) chain E residue 46 type BINDING sequence R description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 19) chain E residue 143 type BINDING sequence K description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 20) chain E residue 146 type BINDING sequence R description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 21) chain E residue 164 type BINDING sequence Y description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 22) chain F residue 46 type BINDING sequence R description BINDING => ECO:0000305 source Swiss-Prot : SWS_FT_FI2

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