eF-site ID 3p83-ABCDEF
PDB Code 3p83
Chain A, B, C, D, E, F

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Title Structure of the PCNA:RNase HII complex from Archaeoglobus fulgidus.
Classification HYDROLASE/DNA BINDING PROTEIN
Compound DNA polymerase sliding clamp
Source Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (RNH2_ARCFU)
Sequence A:  MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVD
PANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKS
ISTKDLVELIVEDESTLKVKFGSVEYKVALIDPSAIRKEP
RIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEG
FRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKE
FCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAP
RIES
B:  MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVD
PANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKS
ISTKDLVELIVEDESTLKVKFGSVEYKVALIDPSAIRKEP
RIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEG
FRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKE
FCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAP
RIES
C:  MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVD
PANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKS
ISTKDLVELIVEDESTLKVKFGSVEYKVALIDPSAIRKEP
RIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEG
FRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKE
FCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAP
RIE
D:  SPEFPGRLMKAGIDEAGKGCVIGPLVVAGVACSDEDRLRK
LGVKDSKKLSQGRREELAEEIRKICRTEVLKVSPENLDER
MAAKTINEILKECYAEIILRLKPEIAYVDSPDVIPERLSR
ELEEITGLRVVAEHKADEKYPLVAAASIIAKVEREREIER
LKEKFGDFGSGYASDPRTREVLKEWIASGRIPSCVRMRWK
TVSNLRQKTLDDF
E:  LMKAGIDEAGKGCVIGPLVVAGVACSDEDRLRKLGVKDSK
KLSQGRREELAEEIRKICRTEVLKVSPENLDERMAAKTIN
EILKECYAEIILRLKPEIAYVDSPDVIPERLSRELEEITG
LRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGD
FGSGYASDPRTREVLKEWIASGRIPSCVRMRWKLRQKTLD
DF
F:  MKAGIDEAGKGCVIGPLVVAGVACSDEDRLRKLGVKDSKK
LSQGRREELAEEIRKICRTEVLKVSPENLDERMAAKTINE
ILKECYAEIILRLKPEIAYVDSPDVIPERLSRELEEITGL
RVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFGDF
GSGYASDPRTREVLKEWIASGRIPSCVRMRWKTVSNLRQK
TLDDF
Description


Functional site

1) chain A
residue 33-56
type prosite
sequence GLHSRAVDPANVAMVIVDIPKDSF
description PCNA_1 Proliferating cell nuclear antigen signature 1. GLhSrAVDpANVaMViVdIpkdsF
source prosite : PS01251

2) chain D
residue 6
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

3) chain D
residue 7
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

4) chain D
residue 101
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

5) chain E
residue 6
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

6) chain E
residue 7
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

7) chain E
residue 101
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

8) chain F
residue 6
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

9) chain F
residue 7
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

10) chain F
residue 101
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

11) chain D
residue 46
type BINDING
sequence R
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

12) chain F
residue 143
type BINDING
sequence K
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

13) chain F
residue 146
type BINDING
sequence R
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

14) chain F
residue 164
type BINDING
sequence Y
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

15) chain D
residue 143
type BINDING
sequence K
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

16) chain D
residue 146
type BINDING
sequence R
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

17) chain D
residue 164
type BINDING
sequence Y
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

18) chain E
residue 46
type BINDING
sequence R
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

19) chain E
residue 143
type BINDING
sequence K
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

20) chain E
residue 146
type BINDING
sequence R
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

21) chain E
residue 164
type BINDING
sequence Y
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2

22) chain F
residue 46
type BINDING
sequence R
description BINDING => ECO:0000305
source Swiss-Prot : SWS_FT_FI2


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