eF-site ID 3oym-AB PDB Code 3oym Chain A, B click to enlarge Title Crystal structure of the PFV N224H mutant intasome bound to manganese Classification RECOMBINATION,VIRAL PROTEIN/DNA Compound PFV integrase Source null (3OYM) Sequence A:  LDAELDQLLQGHYIKGYPKQYTYFLEDGKVKVSRPEGVKI IPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRK DVVKQLGRCQQCLITNASNKASGPILRPDRPQKPFDKFFI DYIGPLPPSQGYLYVLVVVDGMTGFTWLYPTKAPSTSATV KSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLE FSTPYHPQSSGKVERKHSDIKRLLTKLLVGRPTKWYDLLP VVQLALNNTYSPVLKYTPHQLLFGIDSNTPFANQDTLDLT REEELSLLQEIRTSLYHPSTPPASSRSWSPVVGQLVQERV ARPASLRPRWHKPSTVLKVLNPRTVVILDHLGNNRTVSID NLKPTSHQ B:  DRPQKPFDKFFIDYIGPLPPSQGYLYVLVVVDGMTGFTWL YPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTF AEWAKERGIHLEFSTPYHPQSSGKVERKHSDIKRLLTKLL VGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSN TPFANQDTLDLTREEELSLLQEIR Description Functional site 1) chain A residue 62 type sequence H description BINDING SITE FOR RESIDUE ZN A 393 source : AC1 2) chain A residue 66 type sequence H description BINDING SITE FOR RESIDUE ZN A 393 source : AC1 3) chain A residue 96 type sequence C description BINDING SITE FOR RESIDUE ZN A 393 source : AC1 4) chain A residue 99 type sequence C description BINDING SITE FOR RESIDUE ZN A 393 source : AC1 5) chain A residue 128 type sequence D description BINDING SITE FOR RESIDUE MN A 394 source : AC2 6) chain A residue 185 type sequence D description BINDING SITE FOR RESIDUE MN A 394 source : AC2 7) chain A residue 338 type sequence H description BINDING SITE FOR RESIDUE SO4 A 395 source : AC3 8) chain A residue 339 type sequence K description BINDING SITE FOR RESIDUE SO4 A 395 source : AC3 9) chain A residue 357 type sequence H description BINDING SITE FOR RESIDUE SO4 A 395 source : AC3 10) chain A residue 162 type sequence S description BINDING SITE FOR RESIDUE GOL A 801 source : AC4 11) chain A residue 163 type sequence T description BINDING SITE FOR RESIDUE GOL A 801 source : AC4 12) chain A residue 164 type sequence S description BINDING SITE FOR RESIDUE GOL A 801 source : AC4 13) chain A residue 116 type sequence D description BINDING SITE FOR RESIDUE NH4 A 396 source : AC5 14) chain A residue 228 type sequence K description BINDING SITE FOR RESIDUE SO4 A 397 source : AC6 15) chain A residue 332 type sequence S description BINDING SITE FOR RESIDUE SO4 A 397 source : AC6 16) chain A residue 336 type sequence R description BINDING SITE FOR RESIDUE SO4 A 397 source : AC6 17) chain A residue 136 type sequence S description BINDING SITE FOR RESIDUE GOL A 398 source : AC7 18) chain A residue 137 type sequence Q description BINDING SITE FOR RESIDUE GOL A 398 source : AC7 19) chain A residue 241 type sequence K description BINDING SITE FOR RESIDUE GOL A 398 source : AC7 20) chain B residue 128 type sequence D description BINDING SITE FOR RESIDUE MN B 393 source : AC8 21) chain B residue 185 type sequence D description BINDING SITE FOR RESIDUE MN B 393 source : AC8 22) chain A residue 296 type sequence Q description BINDING SITE FOR RESIDUE GOL B 803 source : AC9 23) chain B residue 263 type sequence Y description BINDING SITE FOR RESIDUE GOL B 803 source : AC9 24) chain B residue 267 type sequence Q description BINDING SITE FOR RESIDUE GOL B 803 source : AC9 25) chain B residue 271 type sequence G description BINDING SITE FOR RESIDUE GOL B 803 source : AC9 26) chain B residue 273 type sequence D description BINDING SITE FOR RESIDUE GOL B 803 source : AC9 27) chain B residue 221 type sequence E description BINDING SITE FOR RESIDUE MN B 394 source : BC1 28) chain B residue 224 type sequence H description BINDING SITE FOR RESIDUE MN B 394 source : BC1 29) chain B residue 285 type sequence D description BINDING SITE FOR RESIDUE MN B 394 source : BC1 30) chain B residue 127 type sequence I description BINDING SITE FOR RESIDUE GOL B 395 source : BC2 31) chain B residue 183 type sequence H description BINDING SITE FOR RESIDUE GOL B 395 source : BC2 32) chain B residue 214 type sequence P description BINDING SITE FOR RESIDUE GOL B 395 source : BC2 33) chain B residue 216 type sequence S description BINDING SITE FOR RESIDUE GOL B 395 source : BC2 34) chain B residue 217 type sequence S description BINDING SITE FOR RESIDUE GOL B 395 source : BC2 35) chain B residue 220 type sequence V description BINDING SITE FOR RESIDUE GOL B 395 source : BC2 36) chain B residue 221 type sequence E description BINDING SITE FOR RESIDUE GOL B 395 source : BC2 37) chain B residue 219 type sequence K description BINDING SITE FOR RESIDUE SO4 B 396 source : BC3 38) chain B residue 222 type sequence R description BINDING SITE FOR RESIDUE SO4 B 396 source : BC3 39) chain B residue 258 type sequence S description BINDING SITE FOR RESIDUE SO4 B 396 source : BC3 40) chain B residue 259 type sequence P description BINDING SITE FOR RESIDUE SO4 B 396 source : BC3 41) chain B residue 260 type sequence V description BINDING SITE FOR RESIDUE SO4 B 396 source : BC3 42) chain B residue 133 type sequence L description BINDING SITE FOR RESIDUE HEZ B 397 source : BC4 43) chain B residue 228 type sequence K description BINDING SITE FOR RESIDUE HEZ B 397 source : BC4 44) chain B residue 232 type sequence T description BINDING SITE FOR RESIDUE HEZ B 397 source : BC4 45) chain A residue 123 type BINDING sequence D description BINDING => ECO:0000250 source Swiss-Prot : SWS_FT_FI1 46) chain A residue 185 type BINDING sequence D description BINDING => ECO:0000250 source Swiss-Prot : SWS_FT_FI1 47) chain B residue 123 type BINDING sequence D description BINDING => ECO:0000250 source Swiss-Prot : SWS_FT_FI1 48) chain B residue 185 type BINDING sequence D description BINDING => ECO:0000250 source Swiss-Prot : SWS_FT_FI1

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