eF-site ID 3ov9-B
PDB Code 3ov9
Chain B

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Title Structure of the Nucleoprotein from Rift Valley Fever Virus
Classification VIRAL PROTEIN
Compound Nucleoprotein
Source Rift valley fever virus (strain ZH-548 M12) (RVFV) (NCAP_RVFVZ)
Sequence B:  DNYQELRVQFAAQAVDRNEIEQWVREFAYQGFDARRVIEL
LKQYGGADWEKDAKKMIVLALTRGNKPRRMMMKMSKEGKA
TVEALINKYKLKEGNPSRDELTLSRVAAALAGWTCQALVV
LSEWLPVTGTTMDGLSPAYPRHMMHPSFAGMVDPSLPGDY
LRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPMN
AAVNSNFISHEKRREFLKAFGLVDSNGKPSAAVMAAAQAY
KTAA
Description


Functional site

1) chain B
residue 31
type
sequence Q
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC3

2) chain B
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC3

3) chain B
residue 33
type
sequence F
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC3

4) chain B
residue 202
type
sequence A
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC3

5) chain B
residue 203
type
sequence A
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC3

6) chain B
residue 206
type
sequence S
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC3

7) chain B
residue 109
type
sequence A
description BINDING SITE FOR RESIDUE NA B 247
source : AC4

8) chain B
residue 148
type
sequence S
description BINDING SITE FOR RESIDUE NA B 247
source : AC4

9) chain B
residue 151
type
sequence G
description BINDING SITE FOR RESIDUE NA B 247
source : AC4

10) chain B
residue 66
type SITE
sequence N
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

11) chain B
residue 67
type SITE
sequence K
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

12) chain B
residue 70
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

13) chain B
residue 99
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

14) chain B
residue 106
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

15) chain B
residue 30
type SITE
sequence Y
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

16) chain B
residue 33
type SITE
sequence F
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

17) chain B
residue 125
type SITE
sequence W
description Important for dimerization => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI2


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