eF-site ID 3ov9-ABC PDB Code 3ov9 Chain A, B, C click to enlarge Title Structure of the Nucleoprotein from Rift Valley Fever Virus Classification VIRAL PROTEIN Compound Nucleoprotein Source Rift valley fever virus (strain ZH-548 M12) (RVFV) (NCAP_RVFVZ) Sequence A:  MDNYQELRVQFAAQAVDRNEIEQWVREFAYQGFDARRVIE LLKQYGGADWEKDAKKMIVLALTRGNKPRRMMMKMSKEGK ATVEALINKYKLKEGNPSRDELTLSRVAAALAGWTCQALV VLSEWLPVTGTTMDGLSPAYPRHMMHPSFAGMVDPSLPGD YLRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPM NAAVNSNFISHEKRREFLKAFGLVDSNGKPSAAVMAAAQA YKTAA B:  DNYQELRVQFAAQAVDRNEIEQWVREFAYQGFDARRVIEL LKQYGGADWEKDAKKMIVLALTRGNKPRRMMMKMSKEGKA TVEALINKYKLKEGNPSRDELTLSRVAAALAGWTCQALVV LSEWLPVTGTTMDGLSPAYPRHMMHPSFAGMVDPSLPGDY LRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPMN AAVNSNFISHEKRREFLKAFGLVDSNGKPSAAVMAAAQAY KTAA C:  DNYQELRVQFAAQAVDRNEIEQWVREFAYQGFDARRVIEL LKQYGGADWEKDAKKMIVLALTRGNKPRRMMMKMSKEGKA TVEALINKYKLKEGNPSRDELTLSRVAAALAGWTCQALVV LSEWLPVTGTTMDGLSPAYPRHMMHPSFAGMVDPSLPGDY LRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPMN AAVNSNFISHEKRREFLKAFGLVDSNGKPSAAVMAAAQAY KTAA Description Functional site 1) chain A residue 32 type sequence G description BINDING SITE FOR RESIDUE NO2 A 246 source : AC1 2) chain A residue 33 type sequence F description BINDING SITE FOR RESIDUE NO2 A 246 source : AC1 3) chain A residue 202 type sequence A description BINDING SITE FOR RESIDUE NO2 A 246 source : AC1 4) chain A residue 203 type sequence A description BINDING SITE FOR RESIDUE NO2 A 246 source : AC1 5) chain A residue 206 type sequence S description BINDING SITE FOR RESIDUE NO2 A 246 source : AC1 6) chain A residue 206 type sequence S description BINDING SITE FOR RESIDUE NA A 247 source : AC2 7) chain A residue 209 type sequence I description BINDING SITE FOR RESIDUE NA A 247 source : AC2 8) chain B residue 31 type sequence Q description BINDING SITE FOR RESIDUE NO2 B 246 source : AC3 9) chain B residue 32 type sequence G description BINDING SITE FOR RESIDUE NO2 B 246 source : AC3 10) chain B residue 33 type sequence F description BINDING SITE FOR RESIDUE NO2 B 246 source : AC3 11) chain B residue 202 type sequence A description BINDING SITE FOR RESIDUE NO2 B 246 source : AC3 12) chain B residue 203 type sequence A description BINDING SITE FOR RESIDUE NO2 B 246 source : AC3 13) chain B residue 206 type sequence S description BINDING SITE FOR RESIDUE NO2 B 246 source : AC3 14) chain B residue 109 type sequence A description BINDING SITE FOR RESIDUE NA B 247 source : AC4 15) chain B residue 148 type sequence S description BINDING SITE FOR RESIDUE NA B 247 source : AC4 16) chain B residue 151 type sequence G description BINDING SITE FOR RESIDUE NA B 247 source : AC4 17) chain C residue 32 type sequence G description BINDING SITE FOR RESIDUE NO2 C 246 source : AC5 18) chain C residue 33 type sequence F description BINDING SITE FOR RESIDUE NO2 C 246 source : AC5 19) chain C residue 202 type sequence A description BINDING SITE FOR RESIDUE NO2 C 246 source : AC5 20) chain C residue 203 type sequence A description BINDING SITE FOR RESIDUE NO2 C 246 source : AC5 21) chain C residue 206 type sequence S description BINDING SITE FOR RESIDUE NO2 C 246 source : AC5 22) chain A residue 30 type SITE sequence Y description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 23) chain B residue 66 type SITE sequence N description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 24) chain B residue 67 type SITE sequence K description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 25) chain B residue 70 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 26) chain B residue 99 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 27) chain B residue 106 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 28) chain C residue 30 type SITE sequence Y description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 29) chain C residue 33 type SITE sequence F description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 30) chain C residue 66 type SITE sequence N description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 31) chain C residue 67 type SITE sequence K description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 32) chain C residue 70 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 33) chain A residue 33 type SITE sequence F description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 34) chain C residue 99 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 35) chain C residue 106 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 36) chain A residue 66 type SITE sequence N description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 37) chain A residue 67 type SITE sequence K description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 38) chain A residue 70 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 39) chain A residue 99 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 40) chain A residue 106 type SITE sequence R description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 41) chain B residue 30 type SITE sequence Y description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 42) chain B residue 33 type SITE sequence F description RNA-binding => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI1 43) chain A residue 125 type SITE sequence W description Important for dimerization => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI2 44) chain B residue 125 type SITE sequence W description Important for dimerization => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI2 45) chain C residue 125 type SITE sequence W description Important for dimerization => ECO:0000250|UniProtKB:D3K5I7 source Swiss-Prot : SWS_FT_FI2

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