eF-site ID 3ov9-A
PDB Code 3ov9
Chain A

click to enlarge
Title Structure of the Nucleoprotein from Rift Valley Fever Virus
Classification VIRAL PROTEIN
Compound Nucleoprotein
Source Rift valley fever virus (strain ZH-548 M12) (RVFV) (NCAP_RVFVZ)
Sequence A:  MDNYQELRVQFAAQAVDRNEIEQWVREFAYQGFDARRVIE
LLKQYGGADWEKDAKKMIVLALTRGNKPRRMMMKMSKEGK
ATVEALINKYKLKEGNPSRDELTLSRVAAALAGWTCQALV
VLSEWLPVTGTTMDGLSPAYPRHMMHPSFAGMVDPSLPGD
YLRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPM
NAAVNSNFISHEKRREFLKAFGLVDSNGKPSAAVMAAAQA
YKTAA
Description


Functional site

1) chain A
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE NO2 A 246
source : AC1

2) chain A
residue 33
type
sequence F
description BINDING SITE FOR RESIDUE NO2 A 246
source : AC1

3) chain A
residue 202
type
sequence A
description BINDING SITE FOR RESIDUE NO2 A 246
source : AC1

4) chain A
residue 203
type
sequence A
description BINDING SITE FOR RESIDUE NO2 A 246
source : AC1

5) chain A
residue 206
type
sequence S
description BINDING SITE FOR RESIDUE NO2 A 246
source : AC1

6) chain A
residue 206
type
sequence S
description BINDING SITE FOR RESIDUE NA A 247
source : AC2

7) chain A
residue 209
type
sequence I
description BINDING SITE FOR RESIDUE NA A 247
source : AC2

8) chain A
residue 30
type SITE
sequence Y
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

9) chain A
residue 33
type SITE
sequence F
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

10) chain A
residue 66
type SITE
sequence N
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

11) chain A
residue 67
type SITE
sequence K
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

12) chain A
residue 70
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 99
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 106
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 125
type SITE
sequence W
description Important for dimerization => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links