eF-site ID 3ouo-B
PDB Code 3ouo
Chain B

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Title Structure of the Nucleoprotein from Rift Valley Fever Virus
Classification VIRAL PROTEIN
Compound Nucleoprotein
Source Rift valley fever virus (strain ZH-548 M12) (RVFV) (NCAP_RVFVZ)
Sequence B:  DNYQELRVQFAAQAVDRNEIEQWVREFAYQGFDARRVIEL
LKQYGGADWEKDAKKXIVLALTRGNKPRRXXXKXSKEGKA
TVEALINKYKLKEGNPSRDELTLSRVAAALAGWTCQALVV
LSEWLPVTGTTXDGLSPAYPRHXXHPSFAGXVDPSLPGDY
LRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPXN
AAVNSNFISHEKRREFLKAFGLVDSNGKPSAAVXAAAQAY
KTAA
Description (1)  Nucleoprotein


Functional site

1) chain B
residue 31
type
sequence Q
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC2

2) chain B
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC2

3) chain B
residue 33
type
sequence F
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC2

4) chain B
residue 202
type
sequence A
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC2

5) chain B
residue 203
type
sequence A
description BINDING SITE FOR RESIDUE NO2 B 246
source : AC2

6) chain B
residue 66
type SITE
sequence N
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 67
type SITE
sequence K
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 70
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 99
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 106
type SITE
sequence R
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

11) chain B
residue 30
type SITE
sequence Y
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

12) chain B
residue 33
type SITE
sequence F
description RNA-binding => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI1

13) chain B
residue 125
type SITE
sequence W
description Important for dimerization => ECO:0000250|UniProtKB:D3K5I7
source Swiss-Prot : SWS_FT_FI2


Display surface

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