eF-site ID 3oju-BC
PDB Code 3oju
Chain B, C

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Title Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing c5 modified thymidies
Classification Transferase/DNA
Compound DNA polymerase I, thermostable
Source Thermus aquaticus (3OJU)
Sequence B:  GACCACGGCGCX
C:  AAGGCGCCGTGGTC
Description


Functional site

1) chain B
residue 111
type
sequence C
description BINDING SITE FOR RESIDUE SSJ A 1
source : AC1

2) chain B
residue 112
type
sequence X
description BINDING SITE FOR RESIDUE SSJ A 1
source : AC1

3) chain C
residue 204
type
sequence A
description BINDING SITE FOR RESIDUE SSJ A 1
source : AC1

4) chain C
residue 205
type
sequence G
description BINDING SITE FOR RESIDUE SSJ A 1
source : AC1

5) chain C
residue 209
type
sequence C
description BINDING SITE FOR RESIDUE GOL A 5
source : AC5

6) chain C
residue 210
type
sequence C
description BINDING SITE FOR RESIDUE GOL A 5
source : AC5

7) chain B
residue 107
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 6
source : AC6

8) chain C
residue 211
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 6
source : AC6

9) chain C
residue 212
type
sequence T
description BINDING SITE FOR RESIDUE GOL A 6
source : AC6

10) chain C
residue 211
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 9
source : AC9

11) chain C
residue 212
type
sequence T
description BINDING SITE FOR RESIDUE GOL A 9
source : AC9

12) chain C
residue 213
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 9
source : AC9

13) chain C
residue 206
type
sequence G
description BINDING SITE FOR RESIDUE GOL C 1
source : CC1

14) chain C
residue 207
type
sequence C
description BINDING SITE FOR RESIDUE GOL C 1
source : CC1

15) chain C
residue 205
type
sequence G
description BINDING SITE FOR RESIDUE PGE C 2
source : CC2

16) chain C
residue 206
type
sequence G
description BINDING SITE FOR RESIDUE PGE C 2
source : CC2

17) chain C
residue 207
type
sequence C
description BINDING SITE FOR RESIDUE PGE C 2
source : CC2


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