|
|
eF-site ID
|
3ogo-D |
|
PDB Code
|
3ogo |
|
Chain
|
D |
|
click to enlarge
|
|
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Title
|
Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212 |
|
Classification
|
FLUORESCENT PROTEIN/IMMUNE SYSTEM |
|
Compound
|
Green fluorescent protein |
|
Source
|
Aequorea victoria (Jellyfish) (3OGO) |
|
|
Sequence
|
D: |
KGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKL
TLKFICTTGKLPVPWPTLVTTLXVQCFSRYPDHMKQHDFF
KSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIE
LKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKVN
FKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQ
SALSKDPNEKRDHMVLLEFVTAAGIT
|
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
D |
| residue |
109 |
| type |
|
| sequence |
R
|
| description |
BINDING SITE FOR RESIDUE IPA D 239
|
| source |
: AC2
|
|
|
2)
|
chain |
D |
| residue |
124 |
| type |
|
| sequence |
E
|
| description |
BINDING SITE FOR RESIDUE IPA D 239
|
| source |
: AC2
|
|
|
3)
|
chain |
D |
| residue |
68 |
| type |
MOD_RES |
| sequence |
V
|
| description |
(Z)-2,3-didehydrotyrosine => ECO:0000269|PubMed:8448132
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
4)
|
chain |
D |
| residue |
65 |
| type |
CROSSLNK |
| sequence |
X
|
| description |
5-imidazolinone (Ser-Gly) => ECO:0000269|PubMed:8448132
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
5)
|
chain |
D |
| residue |
69 |
| type |
CROSSLNK |
| sequence |
Q
|
| description |
5-imidazolinone (Ser-Gly) => ECO:0000269|PubMed:8448132
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|